Gene Sbal223_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1912 
Symbol 
ID7090079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2263307 
End bp2264326 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content43% 
IMG OID643460816 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_002357840 
Protein GI217973089 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.103041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.350428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTATA AAATCGCACA GAAAGTCATG TTTCAGATGG ATCCTGAGCG AGCTCACCAT 
CTTGCTATAG GCAGTCTAAA AATGACCGCC AATAGCCCGT TAACGTGCCT GTATGGACAA
ACGATTACAC CGGCTCCCGT GAGCGTTATG GGACTGACTT TTCCTAACCC AGTGGGACTC
GCTGCGGGTA TGGACAAGGA CGGCGAATCG ATTGATGCCT TTCATGCGAT GGGATTTGGT
CATGTTGAAG TGGGCACTGT GACCCCAAGA CCACAACCCG GTAATGATTT ACCCCGTCTA
TTTAGATTAA AGCCTGCCAA AGGCATTATT AATCGCATGG GGTTTAATAA TAAAGGTGTC
GATAATCTGG TCAAAAATTT GATCGCTAAA AAGACCGACA TTATGGTTGG CGTCAATATT
GGTAAAAATA AAGACACCCC AGTAGAACAA GGTAAAGACG ATTATTTGAT CTGCATGGAT
AAAGTTTATC TCCATGCGGC TTATATTGCG GTGAATATTT CATCACCCAA TACCCCAGGA
TTGCGATCGC TACAATATGG CGATCTATTA GATGAATTAT TGAGCGCAAT TAAAACTAAG
CAACTTGAGC TGGCCGAAAA GCATAAAAAA TACGTGCCCA TCGCGCTTAA AATTGCTCCA
GATTTAACCA TCGAAGAAAT TGAAAATATC GCGCAAGCTT TGATTAAAAA CAAATTTGAT
GGCGCAATTG CGACCAATAC TACCTTAACG CGTGATGGTG TTAGCGGTCT TGCCAACGCC
AATGAAAGCG GCGGCTTAAG CGGTAAACCG TTGACAGAGC TGTCTACCAA AGTGATCAAG
CAGTTAGCGA TATGCTTGAA AGGGCAGATC CCGATCATCG GCGTGGGCGG CATCAATAGT
GCCGAAGATG CCTTAGCTAA ATTTGATGCG GGCGCCACTA TGGTGCAGAT TTATTCGGGT
TTTATTTATC AAGGTCCGAA GTTAATTAAA GAAATTGTGA ATGCATATCG CTTAAAATAA
 
Protein sequence
MFYKIAQKVM FQMDPERAHH LAIGSLKMTA NSPLTCLYGQ TITPAPVSVM GLTFPNPVGL 
AAGMDKDGES IDAFHAMGFG HVEVGTVTPR PQPGNDLPRL FRLKPAKGII NRMGFNNKGV
DNLVKNLIAK KTDIMVGVNI GKNKDTPVEQ GKDDYLICMD KVYLHAAYIA VNISSPNTPG
LRSLQYGDLL DELLSAIKTK QLELAEKHKK YVPIALKIAP DLTIEEIENI AQALIKNKFD
GAIATNTTLT RDGVSGLANA NESGGLSGKP LTELSTKVIK QLAICLKGQI PIIGVGGINS
AEDALAKFDA GATMVQIYSG FIYQGPKLIK EIVNAYRLK