Gene Sbal223_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1885 
Symbol 
ID7086559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2226216 
End bp2227172 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content48% 
IMG OID643460789 
ProductAuxin Efflux Carrier 
Protein accessionYP_002357813 
Protein GI217973062 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000274794 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00457022 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAAATA TCGTTGAGCA GTTGCTGTTT TCTGCCTCGA TTACGGGTCC AATCTGTTTG 
ATGTTAGCGC TCGGTGTGAT CCTAAAACGC ACCCAAATCA TCAATGAAAA CTTTATTGAT
GTCGCATCAA AATTAGTCTT TAACGTGACG CTGCCAGCCT TGCTGTTCCT TAGCATTATT
AGCTCCAATC ACGATCTCGC CTCCAGTGCG CCCTTAATTG GCTATGGTTT AGCGGCCAAT
CTCCTGTTTT TTATACTCTC CACCTATGCA ACTGGGCGGC TATTTCCCAA GCACAAAGAC
CAAGGTGTGA TTATTCAAGG AGGATTCAGG GCCAATACCG CGATTATTGG CTTAGCTTAT
GTTTCCAACG CCTACGGCAG TTCTGGTGTT GCTTTAGCTG CGGTTTATGT CGCCTCGATG
ACGCTGCTCT ACAATATTCA AGCGGTTATT TGCCTAAGCC CTAAAGGCGA AGAATCCAGC
CAACGTGCAT TTGGCGTGAT TATTAAAACC ATCACTAAAA ACCCACTGAT CATTGCCATT
ATGATCGGCA TGTTGTTCTA TTTACTTGCT ATTCCAGTAC CGAAAATGGT GCTCGATGCG
GGCCAATACT TTGCCAATAT GACCCTGCCA CTAGCGCTAC TGTGCACTGG TGGTTCGCTC
GATATTGGTT CACTCAAACA TGAAAAGCAT TCAACTTGGT TCTCGACCGC ATTGAAACTG
ATCTTTGCCC CGCTTTTTAT CACGATTGGG GCCTTGCTGT TGGGCTATCG AGGGATTGAG
TTAGCCCTGG TCTTTTTAAT GAGTTCTGCG CCCACCGCAG CCGCAAGCTA TGTGATGGCA
CGCGCCATGG GTGGCAACGC CCCCCTTGCG GCCAATATTA TCGCGCTGAC CACAGTCTGC
TCGCTGATCA CGTGCACCTT AGGCATCTTT GTATTGTCAA CTTTGGAGCT GATCTAG
 
Protein sequence
MGNIVEQLLF SASITGPICL MLALGVILKR TQIINENFID VASKLVFNVT LPALLFLSII 
SSNHDLASSA PLIGYGLAAN LLFFILSTYA TGRLFPKHKD QGVIIQGGFR ANTAIIGLAY
VSNAYGSSGV ALAAVYVASM TLLYNIQAVI CLSPKGEESS QRAFGVIIKT ITKNPLIIAI
MIGMLFYLLA IPVPKMVLDA GQYFANMTLP LALLCTGGSL DIGSLKHEKH STWFSTALKL
IFAPLFITIG ALLLGYRGIE LALVFLMSSA PTAAASYVMA RAMGGNAPLA ANIIALTTVC
SLITCTLGIF VLSTLELI