Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1885 |
Symbol | |
ID | 7086559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2226216 |
End bp | 2227172 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460789 |
Product | Auxin Efflux Carrier |
Protein accession | YP_002357813 |
Protein GI | 217973062 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000274794 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00457022 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGAAATA TCGTTGAGCA GTTGCTGTTT TCTGCCTCGA TTACGGGTCC AATCTGTTTG ATGTTAGCGC TCGGTGTGAT CCTAAAACGC ACCCAAATCA TCAATGAAAA CTTTATTGAT GTCGCATCAA AATTAGTCTT TAACGTGACG CTGCCAGCCT TGCTGTTCCT TAGCATTATT AGCTCCAATC ACGATCTCGC CTCCAGTGCG CCCTTAATTG GCTATGGTTT AGCGGCCAAT CTCCTGTTTT TTATACTCTC CACCTATGCA ACTGGGCGGC TATTTCCCAA GCACAAAGAC CAAGGTGTGA TTATTCAAGG AGGATTCAGG GCCAATACCG CGATTATTGG CTTAGCTTAT GTTTCCAACG CCTACGGCAG TTCTGGTGTT GCTTTAGCTG CGGTTTATGT CGCCTCGATG ACGCTGCTCT ACAATATTCA AGCGGTTATT TGCCTAAGCC CTAAAGGCGA AGAATCCAGC CAACGTGCAT TTGGCGTGAT TATTAAAACC ATCACTAAAA ACCCACTGAT CATTGCCATT ATGATCGGCA TGTTGTTCTA TTTACTTGCT ATTCCAGTAC CGAAAATGGT GCTCGATGCG GGCCAATACT TTGCCAATAT GACCCTGCCA CTAGCGCTAC TGTGCACTGG TGGTTCGCTC GATATTGGTT CACTCAAACA TGAAAAGCAT TCAACTTGGT TCTCGACCGC ATTGAAACTG ATCTTTGCCC CGCTTTTTAT CACGATTGGG GCCTTGCTGT TGGGCTATCG AGGGATTGAG TTAGCCCTGG TCTTTTTAAT GAGTTCTGCG CCCACCGCAG CCGCAAGCTA TGTGATGGCA CGCGCCATGG GTGGCAACGC CCCCCTTGCG GCCAATATTA TCGCGCTGAC CACAGTCTGC TCGCTGATCA CGTGCACCTT AGGCATCTTT GTATTGTCAA CTTTGGAGCT GATCTAG
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Protein sequence | MGNIVEQLLF SASITGPICL MLALGVILKR TQIINENFID VASKLVFNVT LPALLFLSII SSNHDLASSA PLIGYGLAAN LLFFILSTYA TGRLFPKHKD QGVIIQGGFR ANTAIIGLAY VSNAYGSSGV ALAAVYVASM TLLYNIQAVI CLSPKGEESS QRAFGVIIKT ITKNPLIIAI MIGMLFYLLA IPVPKMVLDA GQYFANMTLP LALLCTGGSL DIGSLKHEKH STWFSTALKL IFAPLFITIG ALLLGYRGIE LALVFLMSSA PTAAASYVMA RAMGGNAPLA ANIIALTTVC SLITCTLGIF VLSTLELI
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