Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1873 |
Symbol | mnmA |
ID | 7086547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2214220 |
End bp | 2215338 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643460777 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_002357801 |
Protein GI | 217973050 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000192838 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000114036 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACATCAA TCGAACCCAC TCACACAGGA AAAAAAGTCA TTGTCGGCAT GTCCGGCGGT GTAGATTCAT CTGTTTCAGC CTATTTGCTT ATGCAGCAAG GCTATCAGGT TGAAGGCCTT TTCATGAAGA ACTGGGAAGA AGATGACAAC AACGAGTACT GCGCTGCCGC AGAAGATTTA AAAGATGCCC AAGCCGTGTG CGACAAGCTC GGGATCAAGC TACACACAGT CAACTTTGCA GCCGAATATT GGGACAATGT ATTTGAGTAT TTCCTCGCCG AATACAAAGC CGGCCGCACG CCAAATCCCG ATATCATGTG CAACAAAGAA ATCAAATTTA AGGCATTTTT AGAATTTGCC GACGAAATCC TCGACGCCGA TTACATCGCC ATGGGCCACT ATGTGCGCCG CCGTGATAAT AGCGATGGCA GCACACAAAT GCTCCGTGGC GTCGATGGCA ATAAAGATCA AAGTTATTTC CTCTACACCC TTAGCCACGA GCAAGTGGCT CGAAGTCTAT TCCCTGTCGG TGAATTGGAA AAACATGAAG TACGTGAAAT CGCAAAAGAA ATGGGCCTAA TCACCCATGA TAAAAAAGAC AGCACCGGCA TCTGCTTTAT CGGTGAGCGC AAGTTCACTG AATTCCTGGG CACTTATTTA CCGGCGCAGC CTGGCAATAT CGAAACCCCA GAAGGCGAAG TCATAGGTAC ACACCAAGGG CTGATGTACC ACACCTTAGG CCAGCGTAAA GGCCTAGGCA TTGGCGGCAT GAAAAACAGC AATGACGATC CTTGGTATGT CGTCGATAAA GATCTTGAGC GTAACGTGTT GATCGTAGGG CAAGGCGGAC ACCATCCTCG TTTGATGTCG ACCGGCATGA CAGTTAACCA ACTGCATTGG GTGGATAGAA CCGGACCTGT CGATGGCTGT CATATCGCAG TGAAAACCCG TTATCGCCAA CAAGATGTGC CTTGTACTTT GACCTACACA GATGAACACA CCTTAGGCGT GGTCTTCGAT GAGCCTGTTG CGGCGGTGAC GCCAGGACAG TCTGCGGTAT TTTATGATGG TGAAGTCTGC TTAGGTGGCG GCATCATAGA TCAATTGATC CGAGGGTAA
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Protein sequence | MTSIEPTHTG KKVIVGMSGG VDSSVSAYLL MQQGYQVEGL FMKNWEEDDN NEYCAAAEDL KDAQAVCDKL GIKLHTVNFA AEYWDNVFEY FLAEYKAGRT PNPDIMCNKE IKFKAFLEFA DEILDADYIA MGHYVRRRDN SDGSTQMLRG VDGNKDQSYF LYTLSHEQVA RSLFPVGELE KHEVREIAKE MGLITHDKKD STGICFIGER KFTEFLGTYL PAQPGNIETP EGEVIGTHQG LMYHTLGQRK GLGIGGMKNS NDDPWYVVDK DLERNVLIVG QGGHHPRLMS TGMTVNQLHW VDRTGPVDGC HIAVKTRYRQ QDVPCTLTYT DEHTLGVVFD EPVAAVTPGQ SAVFYDGEVC LGGGIIDQLI RG
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