| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1870 |
|---|
| Symbol | |
|---|
| ID | 7086544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 2210925 |
|---|
| End bp | 2212064 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643460774 |
|---|
| Product | Cupin 4 family protein |
|---|
| Protein accession | YP_002357798 |
|---|
| Protein GI | 217973047 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2850] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000786372 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000146435 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTATACAC TCAATCTCGA TATCGCCCAG TTTCTTAGTG AATACTGGCA AAAGAAACCC
CTGCTGATCA AAAAAGCGTT TCCGCAATTT GAAGATCCGA TCAGCGCCGA CGAACTAGCA
GGCCTTGCCT GTGAAGAAGA AATCTCTTCG CGTATCGTCG TTACTAAAGA CGATAACTGG
GAAGTGGTAC AAGGCCCGTT TGAAGATTAC GACAGCTATG GCGAAACCCA TTGGCAGTTG
CTAGTGCAAG CAGTCAATCA TTGGTATCCC GATTCGCAGC CATTAGTTGA AGCACTACGC
TTTTTACCTG ACTGGCGTTT CGATGACTTG ATGGCCTCAT TTGCGACGCC AAGTGGTGGT
GTGGGCCCAC ACGTCGATAA CTACGATGTG TTTATCATTC AAGGCGAAGG TGAGCGTCGC
TGGACTGTGG GTGACAATAC CCCGCAACAA CGCCGTGGTG GCAATCCCAA TTCGCCGCTG
GTAGAAGACT TCACCCCAAT TATCGATGTG GTGCTAGAAA AAGGCGACAT GCTTTATATT
CCACCTGGTT TCCCGCATTG CGGCGAAACC CTAACAGTGG CAATGAGTTA CTCGATTGGT
TTTCGTGCAC CAAGCCAGCA AGAACTGATC AGTGAAGTCG CCGATTACCT GCTCGACAAT
AACTTAGGTC AACAGCGTTT CACGTCGCAA ACTGAACCCA GTTCAGCGGG TATCGTCAGC
CAAGATCATC AAGTGGGCAT AATGTCACTC TTGAGTCAGC TGAGCCAAGA TCCCAATAGC
TACCAAATCG TGTTAGGTAA GTTGCTTAGT CAAAACCGTT TCGAGCTTGA TTTGTGTGAA
GGCGAAGAAG CTTACAGCAT TGAAGATTTG CAAGATGCCT TCGCCCAAGG CGCTGGCATC
AGCCGTATCG GCGGTTTGAA AGTACTGCGC CTTGAAAATG ACGCCACGCC GCGATTATTC
ATCAATGGTG ATGTGCACGA ATTGCTAAAT ACACCGGCAG ACGTTATCGC ACAGTTGAGC
GATAACGTGA GCTTAAGCGC CGATGAAGCG ACTGAAATAT GTCAGCATGA AGAAGTTCAA
GCCTTACTAT TGAAACTCAT CAATCAAGGT TTCTTCTACT TAAGCGACAG CGAAGAATAA
|
|---|
| Protein sequence | MYTLNLDIAQ FLSEYWQKKP LLIKKAFPQF EDPISADELA GLACEEEISS RIVVTKDDNW
EVVQGPFEDY DSYGETHWQL LVQAVNHWYP DSQPLVEALR FLPDWRFDDL MASFATPSGG
VGPHVDNYDV FIIQGEGERR WTVGDNTPQQ RRGGNPNSPL VEDFTPIIDV VLEKGDMLYI
PPGFPHCGET LTVAMSYSIG FRAPSQQELI SEVADYLLDN NLGQQRFTSQ TEPSSAGIVS
QDHQVGIMSL LSQLSQDPNS YQIVLGKLLS QNRFELDLCE GEEAYSIEDL QDAFAQGAGI
SRIGGLKVLR LENDATPRLF INGDVHELLN TPADVIAQLS DNVSLSADEA TEICQHEEVQ
ALLLKLINQG FFYLSDSEE
|
|---|
| |