Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1850 |
Symbol | |
ID | 7086524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2181885 |
End bp | 2182559 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643460754 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002357778 |
Protein GI | 217973027 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0826767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000859255 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAATTT TGGTTGTTGA AGACGATCCT ATTTTATCCC ACCACTTAAA AGTGCAATTA AGCGATCTCG GCAATCAAGT TCAAGTGGCG CTCACTGCCA AAGAAGGTTT CTATCAAGCC ACGAATTATC CCATCGATGT GGCTATTGTC GATTTAGGTT TACCCGATCA AGATGGCATT AGCTTAATTG AACAACTCAG AGAAGCGGGT CTTAAAGCGC CGATATTAAT CCTCACCGCC CGAGTTAATT GGCAGGATAA AGTCGAAGGC CTTAATGCTG GTGCCGATGA CTATTTAGTC AAGCCCTTTC AAAAAGAAGA ACTCGTCGCG AGACTCGATG CCTTAGTACG CCGCAGTGCA GGTTTTGTTA AACCTGTGAT TTGCAGTGGA GAATTAAAAC TCGATCTCGC CGCTAAACAA GTCACCCTGA GCGATGAAAT CATGGAAGTC ACCGCCTTTG AATATTTGAT CCTCGAATAT TTAATGCGTC ATTGCCATGA GGTGGTTGCC AAACAACGTT TGCTCGATGT GATTTATGGC GATAAAGAAG GCGATCCGAA TACGATTGAA GTCATGGTCA GCCGCCTGCG CAAAAAACTG ACCCGCGATG GGATAGACAA TCCTATCGTC ACCATTCGCG GCCAAGGATA TAAATTTAAC CTGCCATGCA ACTAA
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Protein sequence | MRILVVEDDP ILSHHLKVQL SDLGNQVQVA LTAKEGFYQA TNYPIDVAIV DLGLPDQDGI SLIEQLREAG LKAPILILTA RVNWQDKVEG LNAGADDYLV KPFQKEELVA RLDALVRRSA GFVKPVICSG ELKLDLAAKQ VTLSDEIMEV TAFEYLILEY LMRHCHEVVA KQRLLDVIYG DKEGDPNTIE VMVSRLRKKL TRDGIDNPIV TIRGQGYKFN LPCN
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