Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1835 |
Symbol | sdhB |
ID | 7086509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2165871 |
End bp | 2166578 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643460739 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_002357763 |
Protein GI | 217973012 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0785483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.205707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGA CATTTGCAGT TTATCGCTAC AATCCTGACG TAGATACTAA ACCGTATATG CAGGATTACA CCTTAGAAGT GGCTGAAGGC TCTGACATGA TGGTGCTCGA TGCACTGATC AAGTTAAAAG AGCAAGATCC GACTCTGTCA TTCCGTCGCT CATGCCGTGA AGGTGTGTGT GGTTCTGACG GCGTTAACAT GAATGGTAAA AATGGTCTGG CGTGTATTAC CCCAATTTCA ACCTTTAAAG GGAAGAAATT AGAAATACGC CCATTACCAG GTATGCCAGT TGTTCGTGAC TTAGTCGTTG ATTTAACTCA GTTCTATAAG CAGTATGAGA AGATCAAGCC TTACCTCATC AATGATGAGA AAGCACCAGC CCGTGAACAC TTACAATCAC CTGAAGAGCG TGCTCATTTA GATGGTCTGT ACGAATGTAT CATGTGTGCC TGTTGTTCTA CGGCTTGCCC ATCATTCTGG TGGAATCCTG ATAAGTTTAT CGGTCCAAGC GGTCTGCTTC ACGCATATCG TTTCTTGATC GACAGTCGCG ATACAGCAAC AGAAGAACGT TTATCTGAGC TGGACGACGC CTATAGCGTG TTCCGTTGCC ACGGCATCAT GAACTGCGTT GACGTTTGTC CAAAAGGTCT TAATCCGACT AAAGCAATTG GTCATATTAA GTCCATGCTG TTGAAGCGAG CAGTGTAA
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Protein sequence | MKLTFAVYRY NPDVDTKPYM QDYTLEVAEG SDMMVLDALI KLKEQDPTLS FRRSCREGVC GSDGVNMNGK NGLACITPIS TFKGKKLEIR PLPGMPVVRD LVVDLTQFYK QYEKIKPYLI NDEKAPAREH LQSPEERAHL DGLYECIMCA CCSTACPSFW WNPDKFIGPS GLLHAYRFLI DSRDTATEER LSELDDAYSV FRCHGIMNCV DVCPKGLNPT KAIGHIKSML LKRAV
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