| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1807 |
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| Symbol | |
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| ID | 7088422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2131406 |
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| End bp | 2132242 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643460711 |
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| Product | integrase family protein |
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| Protein accession | YP_002357735 |
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| Protein GI | 217972984 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.73649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000891918 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGTGC AAAAAACAAG CAATACAGCA CCTCATTTAC ATAGCTCAAT TTCACAGGCG
ATTGATTATT ACATCCGCCA TGCAGCGCAA TACCAAAAGG CCTTTGTTAA TTCTGAGCAG
TACCGATATA AGCGCTTAAA AACGGAGTTG GGTTCATATC GCTTGATAGA CCTAACGCCA
GAGCTTATCA GGAGCTTCAT AGACAAGCGA TTGACCAAAG TTAAACCATC ATCAGCAAAG
CGTGACGTTT GTGCCTTACA GCGCTGCTGG AACTGGTACA GACGTGATTT AGGCATGCGA
TTAGATGATC ATTTCAAGCA TGTACGCCTA CCTGTAGATA ACACGGTAAG AGAGTTTATC
CCTACTGATT TTCAACTAAA GCAAATCATT GATTTATTAC CGCTCCATGT AAAACCCATC
ATTGAACTAC TTGCTGAAAC TGCCTGTAGA CGCAGTGAAA TACTCAAACT GACGGTTCAA
GATGTAAACC TTCATCAACG AACCATCTAT TTACGTAATA CTAAGAATGG CTTAGATAGG
GTTGTGCCAC TGAGTAAAAA AGCCTGTGTG ATCTTAAATG AAGCGATTAA TCGAGCCAAA
AACAAGCTAT TCGATATTGA AGCTGATCAT GTAACCAGAC AGTTTAGAAT CTCTGCTGAT
AAAGCGGGAT GCCCTTTATG CGTGGTTCAC AGCCTAAGGC ATTACAAGCT GAGCAAGTTG
ATCTCTCAGG GAATAGATCA TGTTATTGTG GCTAAAATTT CAGGTCATCA GGACATTAGA
ATGTTGCAGC GTTATGTAAA GTTAGATGCT AGTGGACTTG CTCACTTAAT GGATTAG
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| Protein sequence | MNVQKTSNTA PHLHSSISQA IDYYIRHAAQ YQKAFVNSEQ YRYKRLKTEL GSYRLIDLTP
ELIRSFIDKR LTKVKPSSAK RDVCALQRCW NWYRRDLGMR LDDHFKHVRL PVDNTVREFI
PTDFQLKQII DLLPLHVKPI IELLAETACR RSEILKLTVQ DVNLHQRTIY LRNTKNGLDR
VVPLSKKACV ILNEAINRAK NKLFDIEADH VTRQFRISAD KAGCPLCVVH SLRHYKLSKL
ISQGIDHVIV AKISGHQDIR MLQRYVKLDA SGLAHLMD
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