Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1786 |
Symbol | |
ID | 7088320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2104574 |
End bp | 2105287 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643460690 |
Product | peptidase E |
Protein accession | YP_002357714 |
Protein GI | 217972963 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3340] Peptidase E |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000161108 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000000738049 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACAATCA ATGCCCTACT ACTGAGCAGC TCTCGTGTCG GTGATACACC TTATCTTGCC CACGCGATCC CTTTTATTAA ACCGCTTACC ACCAACGCGC AAAAATGGAT TTTTATCCCC TATGCTGGCG TCAGCATGAG TTATGACACT TATTTAGCGT CTGTTGTAAC AGGATTAAGT GAGCTTGAAC TCGATATCAG TGGCATTCAT CAGCATCCCG ATCCTCAACA AGCGATAAAA GATGCCGACG GGATTTTAAT CGGCGGCGGT AACACTTTTC ATTTATTGCA CCAACTATAT CGCTATGATC TGGTTACGCT GATTGGTGAG CAAGTCGCCC TTGGTAAACC TTATATCGGC TGGAGCGCGG GCTCTAACGT ATCGGGACTG AGCATTCGCA CTACGAATGA TATGCCCATC ATCGAGCCGC CGTCGTTCAA GGCATTAAAC TTAGTGCCGT TCCAGCTAAA TCCGCATTAT TCCAATTACC AAGCACCGGG CCACAACGGT GAAACCCGTG CCCAGCGGTT ATTAGAGTTC ACTAAAGTCG ACCCATTGAC TCCAGTGGTC GGCATCGTTG AAGGCTCAGC CCTGTGGCGT CAAGGAGACA AACTCTCACT CTTAGGTGAC CAACCGGCGT ATTTGTTCTG CGGAGAACAG CAAGAAATCC CTATCCCTGT GGGCAGCGAT CTGTCGCACT TACTCAAGGC CTAA
|
Protein sequence | MTINALLLSS SRVGDTPYLA HAIPFIKPLT TNAQKWIFIP YAGVSMSYDT YLASVVTGLS ELELDISGIH QHPDPQQAIK DADGILIGGG NTFHLLHQLY RYDLVTLIGE QVALGKPYIG WSAGSNVSGL SIRTTNDMPI IEPPSFKALN LVPFQLNPHY SNYQAPGHNG ETRAQRLLEF TKVDPLTPVV GIVEGSALWR QGDKLSLLGD QPAYLFCGEQ QEIPIPVGSD LSHLLKA
|
| |