Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1785 |
Symbol | mdoD |
ID | 7088319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2102443 |
End bp | 2104038 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643460689 |
Product | glucan biosynthesis protein D |
Protein accession | YP_002357713 |
Protein GI | 217972962 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000307117 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000192926 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCGAATGA ATCATACGAT GAATTACCCT ACCGGTTATC CGGCATTACT CAAAAAACTA CCTTTTTTCA TCTTGACCGC CATCGTCTAC GTCGTCGGCA TGAATAACGT CAATGCCGCA GCGGCAGAGA CAACCGCAGC ACCTGCGCCT GTACCAGAAA AAAAATCTAA AAATTTTACC CACGATACTG TAGTCGAACT CGCGCAACAA CTGTCGCAAA AACCATTTAA AGAAGCCAAG AAAGCGCCTC AAGAACTAAT CGATCTTGAT TTTGCCACCT ATGGCAAAAT CAATTATCAA GAAAATGCCG CGATTTGGGG CGGTACACCC ACTAAATTTT CAGTACAGCT TTTTGCTCCG GGTTTTCTCT ATAAAAACCT CGTCGACATC GATGTGGTCG AAAACAGCAA AGCGATACCG ATTGAACTCA CTGAGGCCTC GTTCGATGTG CCCAGTGACG CCATCGAAAA ACTCATCACC CAATTGGGTC AATATGCTGG CGTGCGTTTG CATTACCCCA TCAATGACGA TGAAGTAAAA GATGAATTCA TCATGTTTCA AGGCGCAAGC TATTTTCGCG TGCTGTCTAA AGGGCAAACC TATGGCCTGT CTAATCGCGG TTTAGCGATA GATGTCGCCC AGCCTAAAGG CGAAGAATAT CCATTGTTTA AGCGTTTTTG GGTTGAACGA CCATCCAAAT ACCAAACGGC GATTGTGGTG CATGCCCTGC TCGACAGCCA AAGTGTCACG GGTGCCTACC GTTTTGGTAT TTACCCTGGC GCACCATCAC GTGTCGAAGT GGATGTAACC CTGTTCCCAC GCAAAGATAT TCAACATGTT GGCCTTGCAC CGCTGACCTC TATGTTCCTA TTTGGTGGAT TAGATAACTC GGATAAACCC GATTACCGCC CTGAAGTACA CAACTCAGAC GGCTTGCAAA TCGATCGCGG TAATGGCGAG CGTCTATGGC GCCCCTTAAA CAATCCAAAC AAACTACAAG TCAGCGCCTT TGCCGATGAA GATATTAAAG GTTTTGGTCT GATCCAGCGC CATCGTAAGT TTGAAGACTA TCAAGATCTG AGTGCAAACT ATCAACTTCG CCCTTCAGCG TGGATTGAGC CACTCAATGA TTGGGGCAAG GGTCAGCTGG TGTTGATTGA AATCCCATCG AGTGCAGAAA CCAACGACAA CATAGTCACT TATTGGGAGC CACAAGGCGG CCTGAAGAAA GATCAACCCT ATAAATATTC CTATCGTATG ACGGCGTCAA ACGACAGCCC TTCAATCGCG TCAAAGGCAC GAGTGGTCCG CAGTTCGAAG GGGCAAGTGC TCAGCAAGGG TAAAGAGTTA CTCGTCGACT TTAGTAATAT CAAGCCACAA GATATTGATA AAATTAGTAT CGATGCCAGC ATCAACAAAG GCAAAATCCT GTCTACTCGG ATTGTTGCCC ACCCTGACAT CAATGGTGCA CGGGTATTTG TCAGCTTCGA ACCAGAAAGC ACCAATGTAG CCGAACTGAG ATTACAGTTG AAGAAAGACG ATAAACCCCT CGCAGCGACT TGGTTATACC GCTGGAATAG CGACGATTGG CAATAG
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Protein sequence | MRMNHTMNYP TGYPALLKKL PFFILTAIVY VVGMNNVNAA AAETTAAPAP VPEKKSKNFT HDTVVELAQQ LSQKPFKEAK KAPQELIDLD FATYGKINYQ ENAAIWGGTP TKFSVQLFAP GFLYKNLVDI DVVENSKAIP IELTEASFDV PSDAIEKLIT QLGQYAGVRL HYPINDDEVK DEFIMFQGAS YFRVLSKGQT YGLSNRGLAI DVAQPKGEEY PLFKRFWVER PSKYQTAIVV HALLDSQSVT GAYRFGIYPG APSRVEVDVT LFPRKDIQHV GLAPLTSMFL FGGLDNSDKP DYRPEVHNSD GLQIDRGNGE RLWRPLNNPN KLQVSAFADE DIKGFGLIQR HRKFEDYQDL SANYQLRPSA WIEPLNDWGK GQLVLIEIPS SAETNDNIVT YWEPQGGLKK DQPYKYSYRM TASNDSPSIA SKARVVRSSK GQVLSKGKEL LVDFSNIKPQ DIDKISIDAS INKGKILSTR IVAHPDINGA RVFVSFEPES TNVAELRLQL KKDDKPLAAT WLYRWNSDDW Q
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