| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1774 |
|---|
| Symbol | rlmL |
|---|
| ID | 7088308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2084786 |
|---|
| End bp | 2086915 |
|---|
| Gene Length | 2130 bp |
|---|
| Protein Length | 709 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643460678 |
|---|
| Product | 23S rRNA m(2)G2445 methyltransferase |
|---|
| Protein accession | YP_002357702 |
|---|
| Protein GI | 217972951 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.828749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000200873 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAATT TTTTTGCCGC CGCCCCTAAG GGCTTTGAAT ATAGCTTAGC CCAAGAGCTG
ACAGAATTTG GTGCGACTGA AGTAAAAGAG AGTGTTGCTG GTGTGTATTT CACGGCCTCC
TTAGCTTTAG CGTATCGCAT TACTTTATGG ACACGCTTAG CCAGCCGCAT TGTGTTGGTT
ATCTATAAAG GAAGCTGCGA GTCGGCAGAA CAACTCTATA ATGCAGCCTA TTGTGTCGAT
TGGCCGGCAC ACTTTTCCAA TAAAAGCACT TTTAGTATTG ATTTCCATGG TACGGGTGGT
TTTCTTAATA ATACCCAGTT TGGCGCCTTG AAGATTAAAG ATGCGATTGT CGATCGTTTC
CGCGACGATG ATATTGAGCG TCCGAATGTG TCTCGCGTTG ATGCTGAATT TAAAGTCGAT
GCGCATTTCC GTAATGGCGT GATCACTATT GCGATGAACT TCTCGGGTCC ATCGCTTCAT
CAACGTGGCT ATCGTTCGAC CACAGGTGAA GCGCCATTGA AGGAAAACTT AGCCGCTAAC
ATGCTCGTAC GCAGTGGCTG GCAAGCGGCG CCTTCGACCT TGCTCGATCC TTTCTGTGGT
AGCGGTACAG TGCTGATTGA AGCGGCGTTA ATGGCAGCCG ATATTGCCCC TGGTCTGCAA
CGTAGCCGTT TTGGTTTTGA ACATTGGCGT CGCCATGATA AAGCCGTGTG GCAAGAAATC
GTTGAAGAAG CGAAAGCGCG TGCCTCATTA GGCGTGAAAC GTTGCGAGAT TAAATTCTAC
GGTTCTGATA TCGATTCGCG TTTAGTCGCG TTGGCGAAAC GTAACGCCGA AAATGCCGGT
GTACTGGAGT TAATCGAGTT TCAAGTTGCA GATGCTTTAA CGATAGCGCC GCCTGCGGAA
AGCGGCTATT TGATCACTAA CCCACCTTAT GGTGAGCGTT TAGGCAATGT GTCTGAGTTA
TTGCAGCTTT ACTATCAGCT GGGCGACAAG TTTAAGAAAG AGTTTGGCGG CTGGAAAGTG
GCCATGCTGT GTAGTGATAT CGAACTGGTG TCATCGCTAA AGCTTAAAGC CGACAAACAG
ATGAAGATGT TCAACGGCGC GCTTGAATGT GCTTTTAACA TCTACACCTT ACATGCCAAC
AGTACTCGCC GTGATACGCC AGTGCTACCA GATGGCGTCG ACATTGCCGA TATCGCCCCT
GCTTTTGCTA ACCGCATTAA GAAGAATGCC AAGTTATTAG AGAAATGGGC GAAGAAAGAA
GGCATCGACA GCTATCGTAT TTACGATGCC GACATTCCTG AATATAACGT CGCAGTAGAT
AAGTATTTAG ATTACGTGAT TATTCAAGAG TATATGGCGC CAGCGACCAT ACCTGAAGCC
GTGACTAAAC GTCGTTTAAG CGATGTGTTA TTAGCCCTGC CATCGGCCAT TGGCATCAAT
CCTAACAAGA TGATCATGAA GACGCGTGAG CGTCAAAAGG GCACGAGTCA GTATCAAAAG
CTGGATGAGC GCAAGTTAGA GCTTATCACT ACCGAATATG GCGCTAAGTT CAAGTTGAAC
TTAACCGGTT ATTTGGATAC AGGTTTGTTC CTCGATCACA GATTGACACG TCGTTTAGTC
GGTCAAAAAT CTAAAGGTCG CCGTGTACTG AACTTGTTCT CTTACACAGG TTCTGCTTCT
GTACACGCAG CGCTTGGCGG TGCTAAGTCG GTGACGACGG TCGATATGTC CAATACCTAT
ATCGCTTGGG CGAAGGACAA CTTTGCGCTC AATGGACTGC AAGGTAAGCA GTATGAGTTT
GTTCAATCTG ATTGCATGCA GTGGATTAGA GATTGTAATG AACAGTACGA TCTGATCTTT
ATCGATCCGC CAACCTTTTC CAATTCTAAG CGTATGGAAG ATTCGTTTGA TGTACAACGA
GACCATGTGA ACTTACTGGC ATCGTTAGTG AAACTGCTCA GCCCAACGGG CGAGCTTGTG
TTCTCTAACA ATAAACGTAA GTTTAAGATG GACATAGAGA CGCTGACAAA GATGAACATT
AATGTGACGA ACATTGATGA TGTGACTTTG CCTATGGACT ACAAACGTAA TCCACATATC
CATAATACCT GGCTTATTAC CCATGCCTGA
|
|---|
| Protein sequence | MLNFFAAAPK GFEYSLAQEL TEFGATEVKE SVAGVYFTAS LALAYRITLW TRLASRIVLV
IYKGSCESAE QLYNAAYCVD WPAHFSNKST FSIDFHGTGG FLNNTQFGAL KIKDAIVDRF
RDDDIERPNV SRVDAEFKVD AHFRNGVITI AMNFSGPSLH QRGYRSTTGE APLKENLAAN
MLVRSGWQAA PSTLLDPFCG SGTVLIEAAL MAADIAPGLQ RSRFGFEHWR RHDKAVWQEI
VEEAKARASL GVKRCEIKFY GSDIDSRLVA LAKRNAENAG VLELIEFQVA DALTIAPPAE
SGYLITNPPY GERLGNVSEL LQLYYQLGDK FKKEFGGWKV AMLCSDIELV SSLKLKADKQ
MKMFNGALEC AFNIYTLHAN STRRDTPVLP DGVDIADIAP AFANRIKKNA KLLEKWAKKE
GIDSYRIYDA DIPEYNVAVD KYLDYVIIQE YMAPATIPEA VTKRRLSDVL LALPSAIGIN
PNKMIMKTRE RQKGTSQYQK LDERKLELIT TEYGAKFKLN LTGYLDTGLF LDHRLTRRLV
GQKSKGRRVL NLFSYTGSAS VHAALGGAKS VTTVDMSNTY IAWAKDNFAL NGLQGKQYEF
VQSDCMQWIR DCNEQYDLIF IDPPTFSNSK RMEDSFDVQR DHVNLLASLV KLLSPTGELV
FSNNKRKFKM DIETLTKMNI NVTNIDDVTL PMDYKRNPHI HNTWLITHA
|
|---|
| |