| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1693 |
|---|
| Symbol | pflA |
|---|
| ID | 7086299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1979383 |
|---|
| End bp | 1980123 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643460594 |
|---|
| Product | pyruvate formate lyase-activating enzyme 1 |
|---|
| Protein accession | YP_002357621 |
|---|
| Protein GI | 217972870 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | [TIGR02493] pyruvate formate-lyase 1-activating enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00927712 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00567391 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTTA TCGGTCGGAT CCACTCGGTG GAATCCTTTG GCACAGTCGA TGGTCCAGGC
ATACGGTTTA TCACCTTTAT GCAAGGCTGT TTAATGCGCT GCCAATATTG CCACAACCGT
GACACTTGGG ATCTTGATGG CGGAAAAGAA GTTCTGGTCG ATGAGTTAAT GAGTCAAATC
ATCAGCTATC GGCCTTTTCT CGATGCCAGC AATGGTGGTG TTACGGCCAG TGGTGGTGAA
GCCATTTTAC AGGCAGAATT CGTCGCCGAA TTATTCACAG CCTGTCAGCA AGAAGGTATT
CATACCTGTT TAGATACCAA TGGTTTTGTA CGTAAGTACA CGCCAGTGAT TGATGAGTTA
CTCGACCACA CTAACTTGGT CCTGCTCGAC ATCAAACACA TGGACGATGA AAAACATATT
GAGTTAACTA AAGTCAGCAA CCATAGAACA CTGCAATTTG CGCAGTATTT GGCAGAGCGT
AATCAAGCGA CTTGGATACG GTATGTGGTG GTGGGCGGAT TTACCGACGA TGAAGCATCG
GCATTACAAC TGGCCGAGTT TATCAAGCCC ATGAAAAACA TTGAAAAGGT AGAATTACTA
CCCTATCACG AATTAGGTAA ACACAAGTGG GAAGCCATGG GCGAAAGCTA TCAACTCGAT
GGCATATCAC CACCGAGCCG AGAAACCATG GAAAAGATCA AAGCCGTATT TGTTGGGCAA
GGGATTAACG CGATTTATTA A
|
|---|
| Protein sequence | MAVIGRIHSV ESFGTVDGPG IRFITFMQGC LMRCQYCHNR DTWDLDGGKE VLVDELMSQI
ISYRPFLDAS NGGVTASGGE AILQAEFVAE LFTACQQEGI HTCLDTNGFV RKYTPVIDEL
LDHTNLVLLD IKHMDDEKHI ELTKVSNHRT LQFAQYLAER NQATWIRYVV VGGFTDDEAS
ALQLAEFIKP MKNIEKVELL PYHELGKHKW EAMGESYQLD GISPPSRETM EKIKAVFVGQ
GINAIY
|
|---|
| |