| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1675 |
|---|
| Symbol | |
|---|
| ID | 7086281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1958499 |
|---|
| End bp | 1961051 |
|---|
| Gene Length | 2553 bp |
|---|
| Protein Length | 850 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643460576 |
|---|
| Product | protein of unknown function DUF470 |
|---|
| Protein accession | YP_002357603 |
|---|
| Protein GI | 217972852 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0827883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0257354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAGAC GAGTGCGGGT GTTTATTAGC CTTATAATAT TCACTGTCTC ATTACTCTTG
CTTTATAATT TAGAGCAAGA ATATCAATTA AGTGACATTA TTAAAGAGGT TAAAGGATTT
TCATTTGTTG AGTTGTTATG TGCAGCACTA CTCACAGTGG GAAGTTACTC TTTATTAACC
TTGTACGATT TTATTGCCGT TCGGAATATC GATAAGGAGA TACCTTATCG TAAAATAGTC
CCTATTTCTT TTCTGGGTTT TACGTTCTCC AATACCATAG GTTTCTCGCT GTTAACGGGG
ACGTCGATAA GATATAAGTT TTATTCCGAA CTTGGCTTAA GTGGTAATAA AATTACTCAA
ATAGTCATTT CATGTTCAGT AACATTCTTC CTCGGACTCT TTTTTATTTG TGGTATTGCA
CTGGTATGCT TTCCCGCTGA ACAATTATCA GCCTTACCTT TACCAACGTG GCTATTTTCC
TTAACCACAG TGTTCGGTAT TGGCATGCTG CTCAGTGTAT TAGGTTATTT ACTGATGAGT
GTGCTGCGGA AAAAGCCATT TAATTTTCGA GGCTTTGAAA TTACGCCACC TCTGTTATCT
GTATCTTTAA GACAGTTGTT GGTGTCTTCA CTTGATTGGA TTGTCGTAGG AACCTTGTTT
TATAGCTTAC TGCCCGCGGT AGAGAATTTG GGCTATATAC AGGTCTTAAG TATTTTCTTT
GTTGCGAATG CGCTTGGGGT GCTTGCCCAT GTGCCGGGTG GTATTGGGGT GTTCGAGTCC
GTCGTGACTG TGGCCTTATC GCAATATTTA CCGGTTGAGC AAATCCTCGG CGCCATTATT
GTCTATCGGA TCATTTATTA CATTATTCCA TTTTTAATTT CTTTGGCATA CTTTGTTATT
ACGATCGCAC TGTCAAATAA AGATAAAATT GTAAAATTAA ATACTCGAAT TGCATTTATC
CGCCAACTGT TACCACCGCT ACTGAGTATC AGTGTATTTA GCTCAGGTTT ATTATTACTC
TTGTCAGTGG TTAACCCTTC AATTATTCAT AAGTATCACT GGTTAGGTGA GTTAGTACCG
CTGCCTATCA TCGAAATATC GAGCATCATT TTGAGTGTGA GTGGTGTCTT GCTATTGTTG
TTATCCCATG GATTATTTAA ACGCTACCAT AATGCCTTTG AATTAACGAA AAAACTGCTG
TTGGTGGGCA TGTTATTTAT TATGCTTAAG GGCGCGGAAT GGGAAATATC ACTCGCGATA
GGATTAGTGT ACGCATTGAT GTTGCCATGT GAGAATTTGT TTTATCGAAA GGGTTCAGTC
GTCGGGATTA AATACTCTTT GGGTTGGCTG TTATCACTTT CTGCAGCCTT ATTCTTGATG
ATTTGGGTAT TATTTTTCTC CTATCAAGAT GTTGATTATG ATCATTCACT CTGGTTTACC
TTCTCCCCCG ATAGCCATGT ATCACGAGCA TTGCGAGGAG GAGCGATTGC TATCTTTATC
GTGCTTGCCT TTGTCGTGCG CTATTTTTCG TCTCGTACTC AGCTTAAATC ACCACAACTG
GACACGCCTT CATTAAAGCA GGCGATGGAG ATTGTCGCGC AGTCGCCGAG CAGTCATGGC
TATTTAGCCT TAGTGCAAGA TAAATCAATC CTATTTAACG AGGATAAAGA CGCCTTTCTT
ATGTATGCAA GGGCCGGACA TTGCTGGGTG GTAATGGGCG ATCCTATTGG TAATCAACAT
AAATTTGATG ATTTGTTGTG GCAGTTTAGG GAGTTATGCG ATGCCTACGA TGGTTGGCCG
GTGTTTTATC AAGTGACGCA AAAATATCTG CCGAGCTTTT TAGAGCAAGG ATTAGGTTTA
TATAAATTAG GCGAGGAGGC GATTGTTCAG CTCGACCAAT TTGACTTACC GTCGAGTCGC
TATCGGAGTT TGCGCCAGAG TCATGCCAAG GCGCAGCGTG AAGGCTTAAG TTTTGCAGTG
ATTGAGGCGA GCCAAGTGAG GGCCATACTG CCGCAATTAG AAGCCATATC ATCGACTTGG
CTGAAGGCGA AGCAAGGGCG CGAAAAGGGG TTTTCTGTAG GCTATTTCTC TTCCGCCTAT
CTGTGCTCGA CACCTATGGC ATTAGTGTAT GCAAACGGCG AACTCGTGGC GTTTTCAAAT
ATTTGGGCCA GTACCGCTCA GGTTGAATTT TCTGTCGATC TGATGCGTTA CGAGCCTAAA
TTATCGAGCA GTAATATCAT GGATTTTCTG TTTACTGAGC TATTGCTATG GGGAAAACAG
CAAGGCTATC AGAGGTTTAA TCTCGGGATG GCGCCTATGT CAGGCTTGAC TGACAGAGCG
TTGGTGCCAT TTTGGACTAA GCTAGCGAAG GTTGTGTATA AGAAGGGTAA TAAGTTTTAT
AACTTTCAGG GGCTTAGAAG ATACAAGGAT AAGTTTAATC CAACGTGGGA GGCCAAGTAT
TTGATTTGTT ATGGCGGATT ATCTCTGCCA ATTGTAGTGG GCAGTTTAGT GACATTAACG
AGTCGTGGTG CAACCGGTGT ATTTAAAAAG TAG
|
|---|
| Protein sequence | MGRRVRVFIS LIIFTVSLLL LYNLEQEYQL SDIIKEVKGF SFVELLCAAL LTVGSYSLLT
LYDFIAVRNI DKEIPYRKIV PISFLGFTFS NTIGFSLLTG TSIRYKFYSE LGLSGNKITQ
IVISCSVTFF LGLFFICGIA LVCFPAEQLS ALPLPTWLFS LTTVFGIGML LSVLGYLLMS
VLRKKPFNFR GFEITPPLLS VSLRQLLVSS LDWIVVGTLF YSLLPAVENL GYIQVLSIFF
VANALGVLAH VPGGIGVFES VVTVALSQYL PVEQILGAII VYRIIYYIIP FLISLAYFVI
TIALSNKDKI VKLNTRIAFI RQLLPPLLSI SVFSSGLLLL LSVVNPSIIH KYHWLGELVP
LPIIEISSII LSVSGVLLLL LSHGLFKRYH NAFELTKKLL LVGMLFIMLK GAEWEISLAI
GLVYALMLPC ENLFYRKGSV VGIKYSLGWL LSLSAALFLM IWVLFFSYQD VDYDHSLWFT
FSPDSHVSRA LRGGAIAIFI VLAFVVRYFS SRTQLKSPQL DTPSLKQAME IVAQSPSSHG
YLALVQDKSI LFNEDKDAFL MYARAGHCWV VMGDPIGNQH KFDDLLWQFR ELCDAYDGWP
VFYQVTQKYL PSFLEQGLGL YKLGEEAIVQ LDQFDLPSSR YRSLRQSHAK AQREGLSFAV
IEASQVRAIL PQLEAISSTW LKAKQGREKG FSVGYFSSAY LCSTPMALVY ANGELVAFSN
IWASTAQVEF SVDLMRYEPK LSSSNIMDFL FTELLLWGKQ QGYQRFNLGM APMSGLTDRA
LVPFWTKLAK VVYKKGNKFY NFQGLRRYKD KFNPTWEAKY LICYGGLSLP IVVGSLVTLT
SRGATGVFKK
|
|---|
| |