| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1598 |
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| Symbol | fadJ |
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| ID | 7089999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1868382 |
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| End bp | 1870502 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643460499 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_002357526 |
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| Protein GI | 217972775 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.018784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000561354 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAAGA CCTTTAATTT AACCCGCCGC GACGACGGCA TTGCCATCTT GACTATGGAT
GTTCCTGGTG AAAGCATGAA CACCCTAAAA GCGCAGTTTG GCCCTGAAAT CAGTGAAATT
TTGGCCGAGA TAAAAAGTGA TTCGAGCATT CGCGGTTTAG TGCTGATCTC AGGCAAAAAA
GATTCTTTTG TTGCGGGCGC AGATATTTCT ATGCTCGATG CCTGTGAAAC GGCTGGCGAT
GCCAAAGCCT TATCCCAGCA AGGCCATGTG GTTTTTAATG AGTTAGAAGC CTTAAAAATT
CCTGTGGTTG CGGCAATCCA CGGTGCCTGT TTAGGTGGTG GTTTAGAGTT AGCCTTAGCC
TGTCATCAAA GGGTATGTAG CGACGATGGC AAGACTATGC TCGGCGTTCC GGAAGTCCAA
CTTGGCTTAT TGCCAGGCGG CGGCGGGACT CAACGTTTGC CACGTTTAGT CGGCATTACG
ACCGCCTTAG ATATGATGTT GACCGGTAAA CAAATTCGTC CTAAACAAGC CTTGAAAATG
GGCTTAGTGA ATGATGTTGT GCCGCAGACG ATTCTGTTAC AAACCGCAGT TGAGATGGCG
CTTGCGGGTA AACGTGCACC GAAACCAGTT AAAAAGTCAC TCGTTAATCA AGTGCTTGAA
GGCACGAGTT TCGGCCGTAA CATTATTTTC GATCAAGCGA CAAAACAGGT CGAAAAGAAA
ACCCAAGGTA ATTATCCTGC GCCTGCCAAG ATCATTGACT GCGTGCGTCA AGGGATTGCT
AAGGGCATGC AAAAAGGGCT CGAAGTCGAA GCCAGTCATT TTGCCGAATT AGTGGTATCG
AAAGAGTCTG AAGCGCTGCG CAGTATTTTC TTCGCAACCA CAGAAATGAA GAAAGAAACT
GGCGCAGAAG GCGCGAGCCC GCGCAAAGTG AAAAAAGCGG TGATCTTAGG TGGCGGTTTA
ATGGGGGGCG GTATCGCATC TGTCACAACG ACCAAGGCTA AAATCCCTGT TCGTGTCAAA
GACATCAGCG AAAAAGGTTT AAGCAATGCA TTAGCTTATG CCTACAAGCT GTTGGATAAA
GGGGTTAAGC GCCGTCATAT GACGCCTGCT GCTCGTGACA ACCTAATGGC ACTGATGACC
ACAACGACTG AATATAAAGG CGTTAAAGAT GCCGACATCG TTGTGGAAGC GGTATTTGAA
GACTTAGCGC TTAAGCATCA AATGGTGAAA GACATTGAGC GTGAGTGTGG TGAGCACACT
ATTTTTGCGT CAAACACCTC ATCTTTGCCT ATTAGCCAAA TCGCCGAGGC GGCGACACGT
CCTGAGAACG TTATTGGACT GCATTATTTC TCACCAGTAG AAAAAATGCC GCTGGTGGAA
GTGATTGCCC ATGCTAAAAC GTCACCAGAA ACCATTGCGA CCACGGTCGC ATTTGCCCGT
AAGCAAGGTA AAACACCGAT AGTGGTGCAA GACGGCGCGG GTTTCTACGT GAACCGTATT
CTTGCACTCT ACATGAACGA GGCCGCGCAA TTATTACTTG AAGGCCAAAG TGTTGAACAT
CTTGATAAAG CGCTGGTTAA GTTTGGTTTC CCTGTGGGCC CTATTACTTT ACTCGACGAA
GTGGGTATCG ACGTGGGCGC TAAGATTTCA CCGATCCTCG AGAAAGAATT GGGTGAACGT
TTTAAAGCGC CAGCGGCTTT TGACAAGCTT TTGAGTGACG ATCGTAAAGG CCGTAAAAAT
GGTAAAGGTT TCTATCAATA CGGCGCATCG AGTAAGAAAG CTAAAGCTGT CGATGAGAGT
GTTTATGGCG TGTTAGGTAT TAAGCCAGGC ACCAATAAAG ACGCAAAAGC GGTTGCCGAG
CGTTGTGTCG TACAAATGCT CAACGAAGCG GTGCGTTGTT TAGAAGATGG TATTATCGCA
TCACCAAGAG ATGGTGATAT TGGCGCCATT TTCGGTATTG GCTTCCCACC ATTCCTCGGT
GGACCATTCC ACTATATTGA CACTTTGGGC GCCGCGAACT TAGTGAACAT CCTTGAAAGT
TATCAAAGTC AATTCGGTAA CAGATTCGAA CCTTGTGAGC GCTTAAAAAC CATGGCTCAA
GAAAACGCGC ACTTTTTCTA A
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| Protein sequence | MEKTFNLTRR DDGIAILTMD VPGESMNTLK AQFGPEISEI LAEIKSDSSI RGLVLISGKK
DSFVAGADIS MLDACETAGD AKALSQQGHV VFNELEALKI PVVAAIHGAC LGGGLELALA
CHQRVCSDDG KTMLGVPEVQ LGLLPGGGGT QRLPRLVGIT TALDMMLTGK QIRPKQALKM
GLVNDVVPQT ILLQTAVEMA LAGKRAPKPV KKSLVNQVLE GTSFGRNIIF DQATKQVEKK
TQGNYPAPAK IIDCVRQGIA KGMQKGLEVE ASHFAELVVS KESEALRSIF FATTEMKKET
GAEGASPRKV KKAVILGGGL MGGGIASVTT TKAKIPVRVK DISEKGLSNA LAYAYKLLDK
GVKRRHMTPA ARDNLMALMT TTTEYKGVKD ADIVVEAVFE DLALKHQMVK DIERECGEHT
IFASNTSSLP ISQIAEAATR PENVIGLHYF SPVEKMPLVE VIAHAKTSPE TIATTVAFAR
KQGKTPIVVQ DGAGFYVNRI LALYMNEAAQ LLLEGQSVEH LDKALVKFGF PVGPITLLDE
VGIDVGAKIS PILEKELGER FKAPAAFDKL LSDDRKGRKN GKGFYQYGAS SKKAKAVDES
VYGVLGIKPG TNKDAKAVAE RCVVQMLNEA VRCLEDGIIA SPRDGDIGAI FGIGFPPFLG
GPFHYIDTLG AANLVNILES YQSQFGNRFE PCERLKTMAQ ENAHFF
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