| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1590 |
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| Symbol | |
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| ID | 7089991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 1858813 |
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| End bp | 1859376 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643460491 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_002357518 |
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| Protein GI | 217972767 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000165797 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000000274518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGTTTGCTA ACTGGCGTAA GAAATCCGTC GAGCCCGCGG TCTCTTCTGA CATGCTAAGT
AAACAACGAC GATACAACAG CCTAGTCAAG GCGCTACATG CAGACATCTT CCGCTACGCC
TACTGGTTAT GCGGCGATAA ACACGTGGCT GAAGACATTA CCCAAGAAAC CTTCTTGCGG
GCGTGGCGCT CTTTGGATTC CCTCAAGGAT GATAAAGCGG CGAAGGCATG GCTTATCACG
ATTCTTAGGC GTGAGAATGC GCGGCGTTTC GAGCGTAAAC AGTTCGATTA TTCCGACGTT
GAGCAAGATA CCTTAGAGGA CAATATCTCC AATAGCAGTG AAGAGCAGAC CGAGCAATAT
CTGATCCGTC GGCAAATTGG CAAGCTGGAT ATCGAATACC GCGAGCCACT CTTACTGCAA
CTGATTGGTG GCTTTAGCGG CGATGAAATT GCCGAGCTGA TGGAGCTCAA TCGCAACACC
GTAATGACGC GTTTATTTCG GGCGAGGAGC CAATTGAAAG AACTACTTGA GAAGAATGAT
GTGAGAGGTC AATCCAATGG ATGA
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| Protein sequence | MFANWRKKSV EPAVSSDMLS KQRRYNSLVK ALHADIFRYA YWLCGDKHVA EDITQETFLR
AWRSLDSLKD DKAAKAWLIT ILRRENARRF ERKQFDYSDV EQDTLEDNIS NSSEEQTEQY
LIRRQIGKLD IEYREPLLLQ LIGGFSGDEI AELMELNRNT VMTRLFRARS QLKELLEKND
VRGQSNG
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