| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1566 |
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| Symbol | |
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| ID | 7088256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 1833783 |
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| End bp | 1834454 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643460467 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002357494 |
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| Protein GI | 217972743 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.232461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00000912019 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGATAT TTGATTACCA GCCCCCAGCA GTTCCTTGGT TAGACATCCG CTATAAAGAT
AGAGATCTGA TTATCATCAA TAAACCTTCG GGCTTATTGT CTAATCCGGG TCGAGCGGCT
CACACCTTCG ATTGCGCATT AACCCGCTTA CAAACCCTTT ATCCAGAAAC GATTTTAGTG
CATCGGCTCG ACTGCGCGAC CTCGGGTATT ATGGTGTTCG CCCGTAATAA AAAAGCCGAG
TCGCATTTAA AAACGCAGTT TCAAGATAGG CAGAGTAAGA AAGTCTATAT TGCCGAAGTG
ATGGGACATG TGCCGCAGGA ACAGGGCATG ATTGACCTCG CGATTGCGCC AGACACAGAG
CATCCGCCCT ATCAAAAGAC GCTACAGGCA GGAGAGACTG GCGGTAAAAG CGCACTCACC
TACTACCGTG TACTAGAACG CAGAGAAAAC AGCACCTTAG TCGAGCTTTC GCCAGAAACA
GGCCGCACCC ATCAATTGCG TGTGCATATG CTTGCCCTAG GGCATGCGAT TTTAGGCGAT
GAGTTTTACG GTGATGCCGA GGTTATCAAA GCCAAACCGC GTTTATGCTT ACATGCACAA
AGCTTAAGTC TGACTCATCC GTATTCGGCT AAACCGCTCT TTTTTAGCAG TAAACATCCC
TTTAGCGAAT AA
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| Protein sequence | MQIFDYQPPA VPWLDIRYKD RDLIIINKPS GLLSNPGRAA HTFDCALTRL QTLYPETILV
HRLDCATSGI MVFARNKKAE SHLKTQFQDR QSKKVYIAEV MGHVPQEQGM IDLAIAPDTE
HPPYQKTLQA GETGGKSALT YYRVLERREN STLVELSPET GRTHQLRVHM LALGHAILGD
EFYGDAEVIK AKPRLCLHAQ SLSLTHPYSA KPLFFSSKHP FSE
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