Gene Sbal223_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1520 
Symbol 
ID7088210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1776168 
End bp1777370 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content48% 
IMG OID643460421 
Productglucose sorbosone dehydrogenase 
Protein accessionYP_002357448 
Protein GI217972697 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0233321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGA TCACCTTTAA ACTAAGCAGC TTGAATCTAA CGACCTTGAA GCTGAGCACC 
TTAAGTCTTG CCCTGTGTCT TGTTGCAAGC TCACCCGCTA TTTACGCGCA AAACACTAGT
GCTGCAACCA TTAGCGTCAA AACGGAAACG GGTAACATTC AGGTAAAAAC CATAGCCCAA
GGGTTAGAGA ATGTCTGGGG TATGGCATTT TTACCCGACG GCAGCATGCT CGTGACTGAA
CGCGCCGGCA GAATGCGCAT TGTCAGCGCC GCAGGTAAAG TGGGCGAACC CTTAACGGGT
TTGCCACCGC TATATGCCAA GGGCCAAGGT GGTTTACTCG ATGTGGTGCT TGCGCCAGAT
TTTGCCAGCA GCAAAAAAAT CTATTTCAGT TATTCAGAAC CCGCTGAAGG TGATGCAAGT
GAACTCAATA GCACTGCGGT GAGTTTTGCT ACTCTCAATG GCAACAAGCT TGAAAATCTC
AGCCGCGTTT TTAGTCAGCA ACCCAAAATC AACAGCGGCC ACCATTTTGG ATCTCGTTTG
GTGTGGGCGC CTGACGGCAC TTTATTTATC ACACTTGGCG ATCGTTACAG CGAAAAAGAT
AGCGCCCAAA CATTAGACAA TCATTTAGGC AAAGTGGTGC GGATTAATGC CGATGGCTCA
GTGCCTAAGG ATAACCCCTT CATCAATACG GCGGGCGCTT TGCCCGAGAT CTGGTCTATT
GGTCATCGCA ATATGCAAGG CGCGGCCATT AATCCCACCA GCAAAGTATT ATGGACTGGC
GAGCATGGAC CGCAGGGCGG CGATGAACTC AATATTGATG AGGCGGGCAA AAACTATGGC
TGGCCTGTGA TTACCTATGG TGAGAATTAC GGCGGCGGCA AAATCGGCGA AGGCACCCAT
AAGGTGGGAA TGGAGCAACC CGTCTACAAA TGGGTTCCCT CTATTGCCAC GGCGGGCTTT
ATATTTTACA CGGGTGACAA ATTTCCGCAG TGGCAAAATA ATATTTTACT CGCCAGCCTA
AAGGAAAAAA CGCTAGTGCG TTTAGTGCTT GATGGCGACA AGATTATTAA AGAAGAACGG
CTGCTGAAAA ATGAATTGGG GCAAAGATTA CGCTCAGTCG TGCAAGGGCC TGATGGGTTG
ATTTATCTTG TGACCGATGA AGCGAAATCA AAAATTTACC AGATCTCACC GCAGCAATAT
TAA
 
Protein sequence
MKRITFKLSS LNLTTLKLST LSLALCLVAS SPAIYAQNTS AATISVKTET GNIQVKTIAQ 
GLENVWGMAF LPDGSMLVTE RAGRMRIVSA AGKVGEPLTG LPPLYAKGQG GLLDVVLAPD
FASSKKIYFS YSEPAEGDAS ELNSTAVSFA TLNGNKLENL SRVFSQQPKI NSGHHFGSRL
VWAPDGTLFI TLGDRYSEKD SAQTLDNHLG KVVRINADGS VPKDNPFINT AGALPEIWSI
GHRNMQGAAI NPTSKVLWTG EHGPQGGDEL NIDEAGKNYG WPVITYGENY GGGKIGEGTH
KVGMEQPVYK WVPSIATAGF IFYTGDKFPQ WQNNILLASL KEKTLVRLVL DGDKIIKEER
LLKNELGQRL RSVVQGPDGL IYLVTDEAKS KIYQISPQQY