Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1367 |
Symbol | |
ID | 7088792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1595332 |
End bp | 1596225 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643460271 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002357298 |
Protein GI | 217972547 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.780274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00766256 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGCCAT CTATTAGTCT CGATGGATTA ATCGTACTCG ATGCCATTGA TAGAAAAGGC AGTTTTTCCG CAGCGGCCGA GTCCTTGTTC CGTGTGCCGT CGGCGCTGAC CTACACAGTG CAGAAACTGG AAAGCGATTT AGGCACAAAA TTATTTGAAC GTAAGGGCCA ACGCGCCGAA CTGACCTTAG TCGGCCAACT TGTGCTGCGC CAAGGTCGAG AAATCCTTTC GGCAACGTCT AGGCTGGAAG AAGCGGTACG TCAACTCGAG ACCGGCTGGG AGTCTTCGTT AACCTTAGCA ATCGATACTG TCGTGCCGGA TTTACCCCTA TTGCAGTTGA TTGGGGAATT TACTGAGCTG GGTAAGCAAG TGACGGTGAA CATCAGTGAA GAATCCCTAG GTGGCGGCTG GGATGCACTC TATTCGGGCC GTGCCGATAT TGCCATTGGC GTGACGGGTG AACTGCCAAA AGGTCAATAT CATGTGGTCG AAATCGGTGA GTTGGAGTTT GTGTTTGCCT TAAATCCTGC CCATCCATTG GCGCAACATG CGGGTCCTAT TCCGACCGAG GCATTGTTGC AATTCCCTTC CATTGTGGTG GCAGACAGTT CGACGGCCTT AGCGCAGCGT TCGAGCGGTT TATTTGATAG TCGCCAAGTG ATTCGGGTGC CAAATATGCA GACCAAGATA AAGGCGCAGC AATTGGGACT CGGCGTAGGC TACATTCCAA AACACTTGAT TTTGGATGCG TTGGCGGCGC GAAGTTTACT GGCTTGTCAT GTGGAAATGC CGCGCCCACC CCAAGCTGTG TTTATGGCGT GGCGTAAAGA CGCGCAGGGC AAGGCAAAGG ATTGGTTTAC TGAGCGCTTG CCACAATGCG ACTGGCAATT TTAG
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Protein sequence | MLPSISLDGL IVLDAIDRKG SFSAAAESLF RVPSALTYTV QKLESDLGTK LFERKGQRAE LTLVGQLVLR QGREILSATS RLEEAVRQLE TGWESSLTLA IDTVVPDLPL LQLIGEFTEL GKQVTVNISE ESLGGGWDAL YSGRADIAIG VTGELPKGQY HVVEIGELEF VFALNPAHPL AQHAGPIPTE ALLQFPSIVV ADSSTALAQR SSGLFDSRQV IRVPNMQTKI KAQQLGLGVG YIPKHLILDA LAARSLLACH VEMPRPPQAV FMAWRKDAQG KAKDWFTERL PQCDWQF
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