| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1332 |
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| Symbol | |
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| ID | 7088757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 1566045 |
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| End bp | 1567211 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643460236 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_002357263 |
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| Protein GI | 217972512 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000575717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000904617 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCCAA CTGCCGTGAC TACTGCGATG AAGCTCGAAC TGCCGCCACT CAGTCTGTAT
ATCCATATTC CTTGGTGCGT ACAAAAGTGT CCTTACTGCG ACTTTAACTC CCATGGTCAA
AATGGTGAGC TGCCACAGGA AGCCTATGTT GATGCGCTAT TGGAAGACTT ACGCCAAGAT
TTACATCTCG TCCAAGGGCG GCAAATTCAT ACCATCTTTA TCGGTGGCGG CACACCATCC
TTATTCGATG CTTTGCAAAT CAAACGCATA CTCGATGGTG CCAATGCGCT AATCCCCTTT
AGTGACAATA TCGAAATCAC CATGGAAGCC AACCCCGGCA CTTTAGAACA CGATGACTTT
AGTGCCTATC GTGCAGCCGG TGTCACCCGT TTATCTATCG GGGTGCAGAG TTTTTCTAAG
GATAAGCTCA ACTTACTTGG ACGAATTCAC GATCAAAACG AGGCACAAGT CGCTGCTCAA
AAAGCCAGCC AAGCGGGATA CTTGAGTTTT AACCTCGATT TAATGCATGG ATTACCCAAC
CAAAGTTTTG CTGAAGCGAT GGCCGATATC GACACGGCAG CGGCGCTCAA TCCGCCCCAC
CTGTCTTGGT ATCAGTTAAC AATTGAGCCC AACACCCTAT TCCACTCAAA ACCGCCGCAG
TTGCCCGATG ACGAAGCGCT CTGGCATATC TATGAGCAAG GTCAACAAAA GCTGGCCGCA
TTAGGGTATG AGCAATACGA AATATCCGCT TATGCGAAAC CCGGTTACCA ATGTAGGCAC
AATCTCAACT ACTGGCAGTT TGGTGATTAT CTAGGTATAG GCTGTGGCGC CCACGGTAAA
GTGACGCTGC CAGAAGAAAA CCGCATTATA CGCACGGTAA AAATTAAACA TCCCAAGGGA
TATCTGAGTG CCAGCAACTA CACCTTCGAA TCGATTGATG TGGCAGAGGA AGATCGCGCG
CTTGAATATT TAATGAATCG CCTGCGCCTG ATGACACCTA TCCCTAAGCA AGAATTTGAA
CTGCGTACCG GACAACACAG AGACACATTG ACCGAAGGAA TGGAAAAGGC CAAACAACGC
GGTTTACTCA CAGAATCCAC TGAACATTGG CAATTAACCA GCAAAGGTCA CATGTTTGTT
AATGATTTAC TGACACAATT CTGCTAA
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| Protein sequence | MSPTAVTTAM KLELPPLSLY IHIPWCVQKC PYCDFNSHGQ NGELPQEAYV DALLEDLRQD
LHLVQGRQIH TIFIGGGTPS LFDALQIKRI LDGANALIPF SDNIEITMEA NPGTLEHDDF
SAYRAAGVTR LSIGVQSFSK DKLNLLGRIH DQNEAQVAAQ KASQAGYLSF NLDLMHGLPN
QSFAEAMADI DTAAALNPPH LSWYQLTIEP NTLFHSKPPQ LPDDEALWHI YEQGQQKLAA
LGYEQYEISA YAKPGYQCRH NLNYWQFGDY LGIGCGAHGK VTLPEENRII RTVKIKHPKG
YLSASNYTFE SIDVAEEDRA LEYLMNRLRL MTPIPKQEFE LRTGQHRDTL TEGMEKAKQR
GLLTESTEHW QLTSKGHMFV NDLLTQFC
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