| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1291 |
|---|
| Symbol | |
|---|
| ID | 7089854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1527314 |
|---|
| End bp | 1528231 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643460196 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002357223 |
|---|
| Protein GI | 217972472 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.64922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA TAAACGCACC AGAACTCGTC ACCTTGAAGA TGCTGCGGTA TTTCCATCGG
GTTGCTGAAG TAAAAAACTT TACCGCTGCC GCCGAGCAAC TGCATCTATC GAAATCTCCG
CTGAGCGCAC AAATCAAAGA GTTGGAATCG CTCCTTGGTG TTGAGCTGTT TACCCGCAGC
ACTCGGCAAG TAGAGCTCAC ACCCTATGGC CAATTGTTAA GAGAAAAGTG CGAGCAAATA
TTCGCGCTGG TGAATACCTC ATTGGAGCAA GTGGCTCAGC TTGGACGACT CGATAGAAAC
CATATTCGGA TTGGCATCAT GAGCTCGCTG TTTTGGATGG GATTTGGTGA CATACTGAAA
AACTTTCGCA AGCAATGCCC TGAAAATGAG CTGTTCTTTC AAGAGTTATC ACCTGAAACT
CAAAAAGTCG CCTTAGCGCA TCAAGAAATC GATTTTGGCC TAGTGCGCTA CGCCGACACC
TTAAATCTGC CGCACCTCAT CGCCGAAACC ATCACCAGCG AACCTATGGT GTTAGCGCTG
GCAAATAAAC ATCCCTTAGC CAGACGTAAA AGCATCGACT TGAGTGAACT CAAAGATGAG
CCCTTTACCT TACTCAGCCG TGCCAACTCC GCCTCTAGCG ATTTGATTAT CGCCAACTGT
CAGGCCGAAG GATTTATACC GCAGCTGATA CAGGAAATGG TCGAGCCCAA TAGCTTGATG
GCGATCATCG CTGGCGATAA CAGAGTATCC ATAGTGCCGC AAAGTTATGC ATCACAGCCT
TGGCCTAGGG TAAAGTTTAT TAAATTAAAA CAAACAATCC CCGCCGATAT CTGCCTGATT
TATCGGCCAG AAATGGCTTC GCTGCCGATT CTCGATAGCC TGAGGGACTT ATTGAAGCAA
CAAATCAAAA CCATTTAG
|
|---|
| Protein sequence | MSKINAPELV TLKMLRYFHR VAEVKNFTAA AEQLHLSKSP LSAQIKELES LLGVELFTRS
TRQVELTPYG QLLREKCEQI FALVNTSLEQ VAQLGRLDRN HIRIGIMSSL FWMGFGDILK
NFRKQCPENE LFFQELSPET QKVALAHQEI DFGLVRYADT LNLPHLIAET ITSEPMVLAL
ANKHPLARRK SIDLSELKDE PFTLLSRANS ASSDLIIANC QAEGFIPQLI QEMVEPNSLM
AIIAGDNRVS IVPQSYASQP WPRVKFIKLK QTIPADICLI YRPEMASLPI LDSLRDLLKQ
QIKTI
|
|---|
| |