Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1260 |
Symbol | |
ID | 7089823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1490238 |
End bp | 1490747 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643460166 |
Product | RDD domain containing protein |
Protein accession | YP_002357193 |
Protein GI | 217972442 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.014727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000226735 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCAATA CCGAACATGC TAACTTTCCC CGTGCGGGAT TCTTTCGCCG CTTAGGTGCT GCCGTTTACG ATTCGCTGTT AGCCGTGGCC GTTTATATGG TTTCTGGCGC TGTAGGCTTT GGCATTTTCT ACGGCCTTAC CGCTTCTGGA TTGGCTGGCA TGAATGGCTT TGAGCATGTC TCTGACGCGC TCAATGGCAC ACCGATTTAC CACGGTATTT ACCAACTCTG GCTCGTCTTG TGTGTCGGCA CATTCTACGC CTTGTTCTGG AGTAAGGGCG GTCAAACCTT AGGGATGCGC GCTTGGCGGC TTAAGATCCA ACACCCAAAC GGCCAAAACT TAAGCATGAT CACTGCCTAC GCTCGCATCG TTTGGTCACT GCTCGGCATT GGTAATCTGT GGATCCTCAT CAATGGCAAC AAGCTTGCCC TGCAAGATAG TATGACCCGC TCAGAAGTAG TTGTCTTGTC TAAAGAAGCC AACCAAATGC GTAACTGGCA CGGTGCCTAA
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Protein sequence | MLNTEHANFP RAGFFRRLGA AVYDSLLAVA VYMVSGAVGF GIFYGLTASG LAGMNGFEHV SDALNGTPIY HGIYQLWLVL CVGTFYALFW SKGGQTLGMR AWRLKIQHPN GQNLSMITAY ARIVWSLLGI GNLWILINGN KLALQDSMTR SEVVVLSKEA NQMRNWHGA
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