| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1249 |
|---|
| Symbol | |
|---|
| ID | 7088021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1475534 |
|---|
| End bp | 1476025 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643460155 |
|---|
| Product | regulatory protein RecX |
|---|
| Protein accession | YP_002357182 |
|---|
| Protein GI | 217972431 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2137] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.31343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000000185024 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | CTGAGTCAGT CAGCCCGTCA AATCGCGGTC GCGCTGTTAG CGCGCCGCGA TTATTCCCGC
CTACAAATCC GCGATAAATT ACTCGAAAAA GGCTTCGAAC TGAATGATAT CGAACCTGTG
CTCGATGCTT GTGAATCCTC CGGTTTTATC AATGACAATC GTTATGCCGA ATTGTTGGTT
CGTAGCCACA TTAGTCGAGG CCACGGTGCC ATTCGTATTC GCCAAGCGAT AGCGCAAAAA
GGCTTGTCTA AAGATTGCAT TGAAGCGGCG ATAATCAATA GCGATTGTGA CTGGTTTGAG
CTAGCAAAAG ATAAAGCCAC CAAAAAGTAT GGTGTTCCCC GCGTAACAGA AGTGAAGGGC
TCTAAAGCCC GGGAGCTCAT CGCGAAGGAA AAGGCCAAAC GAGTGCGGTT TTTAATGGGC
CAAGGCTTTA GCTACGATCA AATCACTTAT GCGTTAGATT CAGATCCCAA TGATCTCGAC
GACGATTATT AA
|
|---|
| Protein sequence | MSQSARQIAV ALLARRDYSR LQIRDKLLEK GFELNDIEPV LDACESSGFI NDNRYAELLV
RSHISRGHGA IRIRQAIAQK GLSKDCIEAA IINSDCDWFE LAKDKATKKY GVPRVTEVKG
SKARELIAKE KAKRVRFLMG QGFSYDQITY ALDSDPNDLD DDY
|
|---|
| |