Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1242 |
Symbol | surE |
ID | 7088014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1467873 |
End bp | 1468622 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643460148 |
Product | stationary phase survival protein SurE |
Protein accession | YP_002357175 |
Protein GI | 217972424 |
COG category | [R] General function prediction only |
COG ID | [COG0496] Predicted acid phosphatase |
TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0690072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000000649527 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCCGCA TCTTAGTGAG CAACGATGAC GGGGTTAATG CACCGGGGAT CAAAGCCTTA ACTGAGGCGT TGACCGAAAT TGCGACTGTG CTGACAGTGG GGCCAGATCG TAATTGTTCT GGTGCGAGCA ATTCATTAAC CTTGACTAAT CCATTAAGAA TTAATAGGTT AGATAACGGT TACATTTCTG TTCACGGTAC ACCGACTGAT TGTGTGCATT TGGCTATCCG AGAATTGTAC GATGGCGAAC CCGATATGGT GGTGTCTGGT ATCAATGCGG GCGCGAACAT GGGCGATGAT ACCTTGTATT CGGGGACTGT CGCCGCCGCG ATGGAAGGGC GCTTTTTAGG TTTTCCTGCG GTAGCGATTT CGCTCAATGG CCGAAAATTC GAACATTATC AATCGGCGGC GGTTTATGCT CGGCGGATAG TTCAAGGCTT GTTAGCCCAG CCTTTGGCAA AGGATCAGAT TTTAAATGTG AATGTGCCAG ACTTGCCGCT TGATCAAATC AAAGGCATTA AAGTGACTCG CCTTGGCGCT CGTCATAAGG CTGAAGGTAT AGTACGAACG CAAGATCCCG CTGGACGTGA GATCTTCTGG CTCGGCCCTC CAGGACAGGA GCAGGACGCC ACAGAGGGCA CTGATTTTCA TGCTATCGCC AATGGCTATG TGTCAATTAC GCCTTTGACG GTTGATTTAA CTGCCTACGG ACAACTAACG GCATTGCAAA ATTGGGTAGA TAAAATATGA
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Protein sequence | MIRILVSNDD GVNAPGIKAL TEALTEIATV LTVGPDRNCS GASNSLTLTN PLRINRLDNG YISVHGTPTD CVHLAIRELY DGEPDMVVSG INAGANMGDD TLYSGTVAAA MEGRFLGFPA VAISLNGRKF EHYQSAAVYA RRIVQGLLAQ PLAKDQILNV NVPDLPLDQI KGIKVTRLGA RHKAEGIVRT QDPAGREIFW LGPPGQEQDA TEGTDFHAIA NGYVSITPLT VDLTAYGQLT ALQNWVDKI
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