| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1225 |
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| Symbol | |
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| ID | 7087997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1444046 |
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| End bp | 1446256 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643460134 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_002357161 |
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| Protein GI | 217972410 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000385822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000464674 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCTCTG TTCGCGAAGC GCACTTTAAT GATCCCGATT TTCAGTTAGA AGATTGGGTG
GCTCGCTATG TCGGTCATGC CGATGAAGCG CAGATGCTGC TCTCCTTGAT AGGGCAGATT
GACGCCTTAC CAGCCAAGAG TCCTGCGGCG AAGAGAGAAC TGCTCGAACG TGCTCGAGAG
ATGATTGAAA TCCTCGCACC ACTAAACATG GACATTGAAA CCCTGCAAGC GGCAATTTTG
TTTGTGGTGT TCGATGCTGG GTTACTGACC GAAGACGCCA TCAAAGAAAA GTTTGGTGAG
CCGCTGGCGC GTTTAGTGGC GAGTGTTGTG ACCATGAATG CCATCGGCGC CTTGAAAATC
AATCCCAACA GTCGCTCCAC CGAGCCGCAA ATCGACAACA TCCGCCGCAT GTTACTGGCT
ATGGTTGAAG ATGTGCGCGC TGTGGTCATC AAACTGGCTG AGCGTGTGTG TTTGCTGCGG
GCGGTGAAAA ATGCCGACGA AGAAACTCGC GTGCTGCTGG CCCGCGAAAT TGCCGATATT
TACGCGCCGC TGGCTAACCG TTTAGGGATT GGTCAACTAA AGTGGGAGCT GGAAGATATT
TCGTTTCGCT ACCTGCATCC AGATACTTAT AAAGACATCG CTAAGCAATT AGATGGTAAA
CGACTGGATC GTGAAGTCTT TATCGACAAG TTTGTCAGTC AGTTGCAACA AAGATTAGAT
GAAGATCAAA TTCGCGCTAA GGTCTACGGC CGGCCGAAAC ATATCTACAG TATTTGGCGC
AAGATGAAGG GCAAGCACCT CAAATTTGAT GAGTTGTTTG ACGTGCGCGC CGTGCGTATC
GTGACCGATC GTTTGCAGGA TTGCTATGGT GCATTAGGTG TGGTGCATAC GCTTTGGCAC
CATATTCCGC GGGAATTTGA CGACTATGTC GCTAACCCTA AACCTAACGG TTATCAATCG
ATTCATACCG TGGTGGTGGG GCCTGAGGGC AAAACCGTTG AAATTCAAAT TCGTACCCAA
GATATGCATG AAGATGCAGA GCTGGGTGTG GCTGCGCATT GGAAATACAA AGAAGGAAAT
AATCAATCCG GTAAGCAAAG CGGCTACGAA GAAAAAATTA ACTGGCTGCG TAAAATTCTG
CAATGGCAGG AAGACGTGGT CGAAAGTGGC AACTTGGTCG AAGAAGTCCG CAGTCAAGTG
TTTGAAGACA GAGTCTATGT GTTCACCCCA AGCGGTGAAG TTGTCGACTT GCCACTGGGC
TCAACCGTGC TCGACTTTGC CTATTACATT CACTCCCAAG TGGGACATAA ATGTATTGGC
GCTAAGGTCG ATGGCCGTAT TGTGCCGTTC ACCTATCAGG TTGAAACGGG CGAGCGTATC
GAGATCATCA CCTCGAAACA GCCCAATCCC AAGCGCGACT GGCTTAACCC TAACTTAGGT
TATATCCGTA CTTCGCGGGC GCGTTCGAAA ATCCAGCATT GGTTCAAGCA GCAGGACAGA
GACAAGAATA TTGTCGCCGG CAAAGAAATG CTTGAATCTG AATTGGCGCG GGTGAGCTTG
AAAATTAAAG ACGCCGCCAT CGCGGTCGAG CGCTTTAATA TGGCGAGCAT GGATGACTTA
CTGGCGGCGA TTGGCGGCGG TGATGTGCGT CTGCATCAAG TGGTTAACCA TATTCAGAGT
CGTCTGCGAC TCGACGAAGT GTCAGAAGAA GATGCCGTCG AAGAATTAGT TAAGAAAGGC
CAACACAAAC CGACCTCCAG TGGCCGTGGT CAGGTTGAAG TCAACGGTGT GGGTAACTTG
CTTAACCATA TCGCCCGTTG TTGTCAGCCA GTTCCCGGTG ATGAAATCTT AGGTTTTATC
ACTAAAGGCC GCGGCATTTC TGTGCATCGC GCTGATTGTG AACAAGTTAA AGAGTTAATG
CGGGTTCACC CAGAGCGTGG TGTCGATGTG GTCTGGGGCG AAAATTACTC CGGCGGTTAT
CGCATGCGTC TGCGGGTATT AGCCCACGAT CGCAGCGGTT TATTGCGTGA CTTAACCTCA
GTGTTGGCTG CCGAAAAATC CAATGTATTA GCCATGAGCT CGTCATCGGA TACTAAAAAC
CAGACAGCCG CGATTGAGTT GGAACTAGAG CTTTATAACC TCGATGGTTT ATCGCGGGTG
TTATCTAAAC TGACCCAAGT CGATAGCGTG ATCGAGGCAA GACGGCTTTA G
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| Protein sequence | MVSVREAHFN DPDFQLEDWV ARYVGHADEA QMLLSLIGQI DALPAKSPAA KRELLERARE
MIEILAPLNM DIETLQAAIL FVVFDAGLLT EDAIKEKFGE PLARLVASVV TMNAIGALKI
NPNSRSTEPQ IDNIRRMLLA MVEDVRAVVI KLAERVCLLR AVKNADEETR VLLAREIADI
YAPLANRLGI GQLKWELEDI SFRYLHPDTY KDIAKQLDGK RLDREVFIDK FVSQLQQRLD
EDQIRAKVYG RPKHIYSIWR KMKGKHLKFD ELFDVRAVRI VTDRLQDCYG ALGVVHTLWH
HIPREFDDYV ANPKPNGYQS IHTVVVGPEG KTVEIQIRTQ DMHEDAELGV AAHWKYKEGN
NQSGKQSGYE EKINWLRKIL QWQEDVVESG NLVEEVRSQV FEDRVYVFTP SGEVVDLPLG
STVLDFAYYI HSQVGHKCIG AKVDGRIVPF TYQVETGERI EIITSKQPNP KRDWLNPNLG
YIRTSRARSK IQHWFKQQDR DKNIVAGKEM LESELARVSL KIKDAAIAVE RFNMASMDDL
LAAIGGGDVR LHQVVNHIQS RLRLDEVSEE DAVEELVKKG QHKPTSSGRG QVEVNGVGNL
LNHIARCCQP VPGDEILGFI TKGRGISVHR ADCEQVKELM RVHPERGVDV VWGENYSGGY
RMRLRVLAHD RSGLLRDLTS VLAAEKSNVL AMSSSSDTKN QTAAIELELE LYNLDGLSRV
LSKLTQVDSV IEARRL
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