Gene Sbal223_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1223 
Symbol 
ID7087995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1439639 
End bp1442440 
Gene Length2802 bp 
Protein Length933 aa 
Translation table11 
GC content49% 
IMG OID643460132 
Producthybrid sensory histidine kinase BarA 
Protein accessionYP_002357159 
Protein GI217972408 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.915072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00275603 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCCAG TCAACAACAT GACCAAATAC AGCCTACGTT CTTGGGTTCT TGTGCTGGCG 
CTCGCGCCAA CAATCTTGGT CGGTATCCTT CTGGGCAGCT ACTTTACCAT AAATCGTTTT
TATGAGCTTG AAGATACGCT CGTCGAACAG GGCAGCAATA TTATCGAGCC GCTGTCGATT
GCCAGTGAAA TCGGTTTAGT GGCCAATGAT CGCGAGGCAA CCAAACGCTT ACTCGCCGCG
GCGCAGCTCA ACAAATCTAC CCTCGTGAAA TCCATCGCGA TTTTCGATGC CAATAATCAG
CTCTTTGTGA CCTCGCACTA CCACAAAGAC TTTGAAATTA TGCGCTACAA AGAAGCGCTT
AACACACTGC ATAAAACCGA AATTGAGCAT GTGGGCGACA GCCTGATTTT ACGGACACCG
ATTTTCTCCA CCGGGCCCAG CGCCGCTCCC GCCAATTACG ATATTCAGAC AGACGGAGGT
CAGCTCTTAG GTTATATCTC CATCATAATC AATAAAGAAC GTGCCCTACT CGAGCAACAT
AGAGCCGCGG TCGCCGCCTT TATTATCGTG TTGATCGGGG TGCAGTTGAA CCTGCTGTTC
ACTTTCCGGC TGGTGAAAAA CGTCACTCAG CCCATTACCG AGATGGTGCG CGTCGTCGCT
AAAATCCGTG AAGGTAAATT GGACGCCCGC TTAGATGGCA ACTTGATTGG TGAGCTGGAC
TTACTCAAAC GCGGCATCAA TGCCATGGCG GGGTCGTTGT CGGAATACCA TGATGAGATG
CAGCAAAATA TCGACCAAGC CACGTCGGAT CTGCGGGAAA CCTTAGAACA GATTGAAATC
CAAAACGTCG AGTTAGATTT AGCGAAAAAA CGCGCCCTAG AAGCCAGCCG GATTAAATCT
GAATTCTTAG CCAACATGTC CCACGAGTTA CGTACGCCGC TTAATGGGGT TATCGGTTTT
GCGCGGCAAT TGGTGAAAAC CCCTTTGCAT TCGAGCCAAG TGGATTACAT CAAAACCATT
GAGCGCAGCG CCACTAACCT GCTGGGCATC ATCAACGATA TTCTCGATTT TTCTAAACTC
GAAGCCGGTA AAATGGTGTT GGAAAACATG CCCTTCGGTC TAAGGGAAAC CATAGGCGAT
ACCATCACGC TAATCTCGGG CAGCGCTCAG GCGAAGGGCC TAGAACTCGT CGTCGATATC
GCTCCTAACG TGCCCGACAA TGTGAATGGC GATGCCATGC GTGTGTGCCA AATCATCAAT
AACTTGGTCG GTAACGCGAT TAAATTCACC GACTCTGGCA GTGTGATGGT CAAAATCGAA
CTGCAAAGCC AGTCGGAAGA ACAAGTGGTA CTGCGTTGTG ATGTGGTCGA CACCGGTATC
GGTATCGATG AAAGTCAGCA GGACTTTTTA TTCCAAGCCT TTGGCCAAGC CGATTCGTCG
ATTTCACGCC GCTTTGGTGG CACGGGCTTA GGTTTAGTGA TCACTAAACG TTTAGTGAAT
CAAATGGGCG GCCAAATTGG CTTTACTTCA TCCCCAGAAA AAGGCTCAAA CTTCTGGTTC
AGTTTACCGC TCGGCTTAGG TCAGTTCCAA ATCGGTGACT CACTACCACT CGAAAAGCTC
AAAGACAAAA CCATACTGTT TTATGAGCCC AGAGTGCTGA CTCATGCTGT CTTGAGCCGC
CAATTGAATC AATGGGATAC CAAAGTGACT CACCATCAGC ATATCCCAAG CTTGCTGACC
ACACTCAACA CGGCCGAAGC GCCATACGAC TATGTTCTCT TGAGTTGCCA TGGGTTTAGC
GATGCAGGAC AACTGGTAAG CACACTTAAC TTGGCGAAGA CCAAAACCGA TTGCCTTGTG
GTGCTATACG ATTGCCAAGA ACAGGATGCC TTAACCCAAT TTATCCGCCC GAATGCCGAT
GTGGTGTTGT CTCTGCCCGT GAGTGAGCAC CAGCTTGCCC GCAACTTACT CTATCCACCG
ATGGAATACG ACATCATAGC CCCAGTGACC ATAGCCACGC CGGCGGCGCG CCAATCCTTA
ACCGTACTGG CGGTGGATGA TAACTTTGCT AACTTAAAGC TAATCGATAC CTTGCTCAGC
GAGTTAGTGA CAACGGTAGT TGCGGTCAAC AGTGGCGATG AAGCAGTTAA ACAGGCGAAG
ACTCGCACCT TCGATTTGAT TTTTATGGAT ATTCAGATGC CAGGTACAGA TGGCATCAGC
GCCACTAAGC AAATTCGCCA AGGCTCGATG AACCGTAACA CGCCGATTAT TGCCGTGACG
GCCCATGCGA TTGCCGAAGA ACGCGAGCTG ATTTTAGGCA GTGGCATGGA TGGATATTTG
CCTAAACCTA TTGATGAAGC GGCGCTCAAA GACGTTATCC ATCGCTGGAT CACTCGGCCT
AAATTCACCC ATTTTGACCT GCATACGCTG AACTGGGATT TATGCTTAAC CCAAGCTAAT
CACAAGGCAG ACCTCGCCTT AGATATGCTG AGAATGTTGC TCGACTCTTT ACCGCAAACC
GTGACAACAA TTCAGACGGC GCTGAGTCAA AACGATCACC CCGTCATGCT CAGTACAATC
CATAAGTTGC ATGGGGCCAG TTGCTACTGC GGCGTGCCAA CAACCCAAAG ATTATGCCAA
GAAATTGAAT CGGCGCTAAA ACGTGAAACT TCGGTCGAAG ATCTCGAACC CGAAATACTA
GAGTTACTTG ATGAGTTAAC TAAGGTAGAA TCTGCGGCAA ATCAAGTGAT ATCACAGCTA
TCAGCGGAAA TAACAGATGA CCAAAAAAAC GGGCTTCTTT AA
 
Protein sequence
MNPVNNMTKY SLRSWVLVLA LAPTILVGIL LGSYFTINRF YELEDTLVEQ GSNIIEPLSI 
ASEIGLVAND REATKRLLAA AQLNKSTLVK SIAIFDANNQ LFVTSHYHKD FEIMRYKEAL
NTLHKTEIEH VGDSLILRTP IFSTGPSAAP ANYDIQTDGG QLLGYISIII NKERALLEQH
RAAVAAFIIV LIGVQLNLLF TFRLVKNVTQ PITEMVRVVA KIREGKLDAR LDGNLIGELD
LLKRGINAMA GSLSEYHDEM QQNIDQATSD LRETLEQIEI QNVELDLAKK RALEASRIKS
EFLANMSHEL RTPLNGVIGF ARQLVKTPLH SSQVDYIKTI ERSATNLLGI INDILDFSKL
EAGKMVLENM PFGLRETIGD TITLISGSAQ AKGLELVVDI APNVPDNVNG DAMRVCQIIN
NLVGNAIKFT DSGSVMVKIE LQSQSEEQVV LRCDVVDTGI GIDESQQDFL FQAFGQADSS
ISRRFGGTGL GLVITKRLVN QMGGQIGFTS SPEKGSNFWF SLPLGLGQFQ IGDSLPLEKL
KDKTILFYEP RVLTHAVLSR QLNQWDTKVT HHQHIPSLLT TLNTAEAPYD YVLLSCHGFS
DAGQLVSTLN LAKTKTDCLV VLYDCQEQDA LTQFIRPNAD VVLSLPVSEH QLARNLLYPP
MEYDIIAPVT IATPAARQSL TVLAVDDNFA NLKLIDTLLS ELVTTVVAVN SGDEAVKQAK
TRTFDLIFMD IQMPGTDGIS ATKQIRQGSM NRNTPIIAVT AHAIAEEREL ILGSGMDGYL
PKPIDEAALK DVIHRWITRP KFTHFDLHTL NWDLCLTQAN HKADLALDML RMLLDSLPQT
VTTIQTALSQ NDHPVMLSTI HKLHGASCYC GVPTTQRLCQ EIESALKRET SVEDLEPEIL
ELLDELTKVE SAANQVISQL SAEITDDQKN GLL