Gene Sbal223_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1218 
Symbol 
ID7087990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1434679 
End bp1436337 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content48% 
IMG OID643460127 
Productrecombination and repair protein 
Protein accessionYP_002357154 
Protein GI217972403 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.187963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0934404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTGCC AACTCAGCAT TAATAACTTC GCTATCGTCC GTTTTTTAGA ACTGGATTTT 
CGCCCCGGTA TGACCAGCAT CACAGGTGAA ACCGGTGCAG GTAAATCGAT CGCCATCGAT
GCGTTAGGCC TGTGCCTAGG CAATCGCGCC GATGCCAGCA GTGTTCGCCC CGGAGCCAAT
AAAACCGAGG TCAGCGCCCG CTTTTCCTTG GATGATATTC CACTGGCAAA ACGTTGGTTA
GAAGATAACG ATCTTGAACT CGATGATGAG TGCATCCTAC GTCGAACTAT TGGTAGCGAT
GGCCGTTCAC GCGCCTATAT CAATGGGAAT CCAGTGCCAC TGACGCAACT CAAATTACTG
GGTCAGTTGC TCATCGGTAT TCACGGCCAA CATGCGCACC ATGCGATGTT AAAAAGTGAA
CACCAACTCA CCCTGCTCGA CAGTTATGCC AACCACAGAT TGCTTATCGA TACGGTTGCC
GCCAGTTTTC AACGCTGCAA ACAAATTGAG GCCGATCTAA AGCAACTCGA AGCCTCCCAG
CATGAACGTA TTGCCCGTAA GCAATTAGTG CAATATCAAG TAGAAGAACT CGATGAGTTT
GATCTTAAAG TCGATGAGTT CGATGAAATT GAGCAAGAGC ACAAACGTCT GGCCAATGGC
ACTGAGTTGA TTGATACCTG TCAGGCGAGC TTAGATATAC TCACTGAAGG CGAAGAGAAC
AATATAGAGT CGCTGCTTAA TCGAGTCGTT TCCCTCGCCG AAGATCTGCA AAGCTACGAT
CCTGCATTAA GCAATATCAA CACTATGCTC AATGATGCCT TAATCCAAGT GCAAGAAAGC
GCAGGCGAAT TACAGCACTA TTTGAGTAAG CTTGAACTCG ATCCAACCCA CTTTGCCTAT
TTAGAAGAAC GGCTATCAAA AGCCATGCAA CTGGCGCGTA AGCACCATGT CAGCCCAAAT
AAACTGGCCG AACATCATTT GGCATTAAAG GCAGAGCTGA GCACCTTAGA CAGTGACGAA
AGCAAGCTCG AAGAAATTCA ACTACAGGTC GATGCCAGCA GAGCCGCTTA CCTTAGCAAC
GCACAAAAAC TCAGCCAAAG CCGCGCTAGA TATGCCAAAG AACTCGACAA ACTGGTGACT
CAGTCAATCC ACGAACTGAA TATGCCTAAG GGTAAATTTA CTATCGAAGT CAATTTCCAC
CCAGAGCAAA TGTCAGCCAA CGGCAGTGAC AACATCGAAT TCATGGTCAC CACTAACCCT
GGCCAACCCT TACAACCGAT TTCGAAAGTC GCGTCTGGCG GTGAGCTTTC ACGGATAGGC
TTAGGGATCC AAGTGATTAC CGCGAAGAAA GTTGCCACGC CAACATTGAT TTTCGATGAG
GTGGATGTCG GGATTTCAGG CCCCACCGCC GCAGTAGTTG GCCGCATGTT ACGCAGCTTA
GGGGAATCGA CCCAAGTACT GTGCGTGACT CACTTACCGC AAGTTGCGGG CAATGGTCAT
CAACACATGT TCGTCGATAA GTTTAATAAG GCGGGCAGTA CTGAGACCAC AATGAAGTCG
CTCGATCGTG AGCAACGTAT TCAAGAACTT GCAAGGCTGT TAGGTGGCGA TACTATCACT
AGCAATACCC TAGCGAACGC AAGGGAACTG CTGCAATAA
 
Protein sequence
MLCQLSINNF AIVRFLELDF RPGMTSITGE TGAGKSIAID ALGLCLGNRA DASSVRPGAN 
KTEVSARFSL DDIPLAKRWL EDNDLELDDE CILRRTIGSD GRSRAYINGN PVPLTQLKLL
GQLLIGIHGQ HAHHAMLKSE HQLTLLDSYA NHRLLIDTVA ASFQRCKQIE ADLKQLEASQ
HERIARKQLV QYQVEELDEF DLKVDEFDEI EQEHKRLANG TELIDTCQAS LDILTEGEEN
NIESLLNRVV SLAEDLQSYD PALSNINTML NDALIQVQES AGELQHYLSK LELDPTHFAY
LEERLSKAMQ LARKHHVSPN KLAEHHLALK AELSTLDSDE SKLEEIQLQV DASRAAYLSN
AQKLSQSRAR YAKELDKLVT QSIHELNMPK GKFTIEVNFH PEQMSANGSD NIEFMVTTNP
GQPLQPISKV ASGGELSRIG LGIQVITAKK VATPTLIFDE VDVGISGPTA AVVGRMLRSL
GESTQVLCVT HLPQVAGNGH QHMFVDKFNK AGSTETTMKS LDREQRIQEL ARLLGGDTIT
SNTLANAREL LQ