| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1216 |
|---|
| Symbol | |
|---|
| ID | 7087988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1433064 |
|---|
| End bp | 1434035 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643460125 |
|---|
| Product | thiamine-monophosphate kinase |
|---|
| Protein accession | YP_002357152 |
|---|
| Protein GI | 217972401 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0611] Thiamine monophosphate kinase |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000120227 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.180356 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCAAACT GTACAGTGAA AGAATTCCAA TTAATTGAAT GTTATTTTAG CAACCGCGGC
CCCACTCGCC GTGATGTGAA GCTTGGCATC GGTGACGATT GCGCTTTAGT GCAACCAGCA
GAAAACAAGT CGATTGCTAT CTCCTGTGAC ACCTTAGTCG AAAATGTCCA TTTTTTTCCC
GATATGCCTC CTGCTGCCTT AGGTTACAAA GCCTTAGCGG TAAATTTATC TGATCTGGCT
GCCATGGGCG CAGAGCCCGC GTGGATGACG CTTGCCTTAA CGCTACCCGA AGTCGATGAA
ACTTGGCTCA GCGGTTTTAG CGAAGGTTTA TTTGAAGCGG CCGATTACTA TGGCATCGCC
TTAATTGGCG GCGATACGAC TCGTGGCCCA CGGGCGATTA ATATCACAGT GCACGGCCAA
GTCCCACAGG GTAAAGCACT CACGCGTCAT GGTGCTAAAG CTGGTGATTG GATTTATGTC
ACGGGCACGC TCGGAGATTC GGCCTTAGGT CTGGATATCA TTCGCGGCGC GCAACAGGCT
AGAGCTGAGC ACAAAGAATT CCTGATTAAT CGCCATTATC GCCCAACACC AAGAGTCTTA
GCGGGCCAAG CTTTGCGCTC GCTTGCCTCC AGTGCTATCG ACCTTTCCGA CGGGTTTATC
TCGGATATCG GTCATGTGCT TAAGGCTTCG GCAGTTGGTG CGGTTGTCGA TGTTAATTGC
ATCCCGCTTT CGCGCGCGAT GCAAGATACC GTCAGTGAGG AGCATGCCTT AGGTTATGCG
CTAACGGGCG GCGAAGATTA CGAATTGTTG TTCACCGTTC CTGAGGCGCA AAAAGGCGCG
CTCGAGACAG CATTAAGCCA TGCAGGAGCA AAGTTTGTTC GTGTTGGGCA AGTTTGTGCG
GGCAGTAAGC TCAAGTTACA ACTCAATGGT GAGCCATTTA CGCCGCCGTA TCACGGTTTC
GAGCACTTTT AA
|
|---|
| Protein sequence | MPNCTVKEFQ LIECYFSNRG PTRRDVKLGI GDDCALVQPA ENKSIAISCD TLVENVHFFP
DMPPAALGYK ALAVNLSDLA AMGAEPAWMT LALTLPEVDE TWLSGFSEGL FEAADYYGIA
LIGGDTTRGP RAINITVHGQ VPQGKALTRH GAKAGDWIYV TGTLGDSALG LDIIRGAQQA
RAEHKEFLIN RHYRPTPRVL AGQALRSLAS SAIDLSDGFI SDIGHVLKAS AVGAVVDVNC
IPLSRAMQDT VSEEHALGYA LTGGEDYELL FTVPEAQKGA LETALSHAGA KFVRVGQVCA
GSKLKLQLNG EPFTPPYHGF EHF
|
|---|
| |