| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1192 |
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| Symbol | |
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| ID | 7087964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1405303 |
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| End bp | 1407609 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643460101 |
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| Product | diguanylate cyclase/phosphodiesterase with extracellular sensor |
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| Protein accession | YP_002357128 |
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| Protein GI | 217972377 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAATA GTTTTCGCGC ACGGCTGATT TTAGTTTTCT TTATTGTGCT GACTCTAGTG
CAGTTTGCCA CGGCATTTTC TGTATTGACG GCGACCGAAA GGGACAACTT TTTACAGCAA
CAAAAAAGTT TAGATATTGG TGCCAATGTG TTTCTCGAAG TCCTTTCGAA TCGCGGTATT
CAGCTCAGCC AAAGTTTGTC CGTGCTCAGT GCCGATTTTG GTTTTAAGCG CGCGATTGCC
ACAGGCGAGC AAGAAACCAT TGAGTCAGTG TTATCTAATC ACGGCTCTCG TATCGGCGCC
GACGCTGCAG TATTGTTGTC TCCAAAAGGA GAGCTCTTGA CCTCGAGTCT GCCCGGACTC
ACTCAGGATG ACATTCAATC CTTATTCGAT ATGACCACTA GCAATAACAA TGCTTTAGCT
ATCCTTAATT TTGATCATGC CAGCTATCAG TTTGTGTTGC AGCCCGTGAA GGCGCCGACC
TTGATTGCTT GGGTCGGAAT GGGGTTCCTA TTGGATGAGA AAGTCGCCCA ACAAGCTAAA
GCCATTACCG GTATCGATGT CAGCTTTGTC AATCAAGCCA CGGGTCGCAC CGAAATCGCG
TCAACCTTAT CCGACGATGA AAAACGCAGT GTGGTAGAGC AGGCGAGCCT ATTCCCCAGC
CTACTGAAAA TGCCCAGTGA GAACATTCCC GTGGACTATC TGTCCATGGC GATCAAACTC
TATGATCATA ACGGCAGCCA ATTAGCCCTA CTGCATCAGT CAAACCTTAA GTGGCAGCAA
AGTTATCAGC ATCTACGCAA TAATATGTTG CTGATTTTTG CCTTGACCTT AGCGCTGGCG
ATTGTGATTG CGATTTGGTT GTCGGGCAGT TTGACTGAGC CCGTGCATCA ACTGGTAACC
TATGCCCGTA AAATTGGTCA AGGTAAGCAG CCTGGCAGTA TTCAAGGTGC GCCAGCAGAA
CTGCGGGTGT TGGCCAAAAG TTTGTCCTTG ATGCGCGACG ATATTGAGGC GCGGGAAAAG
GATTTAGTCT ATCAATCCCG CCACGACAGT TTGACGGGAT TGCTCAATCG TTTTGCGGCA
AAACAGCATT TAGCGGATCT TAAACATGAG CTAGCCGGCG CTATGGTATT GCTGGATATT
AAACATTTTC GCCATATCAA CGACATTATC GGTTTTGCCA ACGCAGATAC CTTGTTGGTG
CTTTTTGCCC GCCGTTTAGA GCAATTAGCC CCCACACCGG ATTTACTCGC GCGATTAGAT
GGCGACTCTT TTTTACTCCT ATATAGCCAA GGTATTCGTC CCGAGCACTT GTTGAAATCA
TTGGATATGT TGGAGTCGCC ATTTCCAATC CAAGGCTCAA ATATCTCTCT TACCGTGCGG
GCGGGATTAC TGGAAATCGA TGGCAATGGT GCCGATATCG ATGTGTTAGT GCGCCGCGCC
GAAATTGCCC TCAATCAAGC CTGTCTCGAG GAGCAACGCA TCGTCAGTTA TCGTCAGGGT
GCCGATGAGA AATACCAGCG TGAGCTGACT ATTATCCGCG ATTTACCCAT AGGTTTGGCG
CAAAACCAAC TCTATCTCGT GTTTCAACCT AAGGTGGATT TACACTTAAA TCAGTGTACT
GGCGCCGAGG CACTGATCCG CTGGCAGCAT CCAACCTTAG GGTTTATTCC GCCCGATGAG
TTTATTCAAC TCGCTGAAAA CTCTGGCAAC ATTGATATAG TCAGCCAATG GGTGTTGAAG
CAGGCGATTA AACAATTAGT CGCATGGCAG CAGCGGGGTA TGCTGCTAAA ACTGGCCATT
AACCTGTCGG CCCATGATTT AGTCGATACC CGCTTGCCGA ATCAAATTGC TAGTTTATTA
AAAGATAATA ATCTGCCAAG CGGCGCACTC TGCATCGAAG TTACCGAAGG CGCTGTGATG
AAAGATGCAC AGACTGTGGT GAGCGTATTG CAGCGATTCC GTGACATGGG TGTATCCGTC
GCCATCGATG ACTTTGGCAC AGGGCATTCA TCCTTAGCTT ATTTGAAAAT TTTGCCGGTC
AATGAAGTGA AGATTGATCG TAGTTTTATC AAAGACATGC TCACGAATAG CCAAGATGTG
ATGATAGTAA ACACGAGCAT TCAGTTGATC CACGGTCTAG GTTTTACCGT CGTGGCCGAA
GGGGTTGAGG AACCAGAAGG CGTTGAAATC CTGCGTAACC TCAATTGCGA CATCATCCAA
GGCTATGTGT TTTCAAAACC CTTAAAAGCG GCTGAATTTG ATCTGTGGTT CGAAGCGTTT
AACCATGCAA ATCCCTCAGA CACATAA
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| Protein sequence | MLNSFRARLI LVFFIVLTLV QFATAFSVLT ATERDNFLQQ QKSLDIGANV FLEVLSNRGI
QLSQSLSVLS ADFGFKRAIA TGEQETIESV LSNHGSRIGA DAAVLLSPKG ELLTSSLPGL
TQDDIQSLFD MTTSNNNALA ILNFDHASYQ FVLQPVKAPT LIAWVGMGFL LDEKVAQQAK
AITGIDVSFV NQATGRTEIA STLSDDEKRS VVEQASLFPS LLKMPSENIP VDYLSMAIKL
YDHNGSQLAL LHQSNLKWQQ SYQHLRNNML LIFALTLALA IVIAIWLSGS LTEPVHQLVT
YARKIGQGKQ PGSIQGAPAE LRVLAKSLSL MRDDIEAREK DLVYQSRHDS LTGLLNRFAA
KQHLADLKHE LAGAMVLLDI KHFRHINDII GFANADTLLV LFARRLEQLA PTPDLLARLD
GDSFLLLYSQ GIRPEHLLKS LDMLESPFPI QGSNISLTVR AGLLEIDGNG ADIDVLVRRA
EIALNQACLE EQRIVSYRQG ADEKYQRELT IIRDLPIGLA QNQLYLVFQP KVDLHLNQCT
GAEALIRWQH PTLGFIPPDE FIQLAENSGN IDIVSQWVLK QAIKQLVAWQ QRGMLLKLAI
NLSAHDLVDT RLPNQIASLL KDNNLPSGAL CIEVTEGAVM KDAQTVVSVL QRFRDMGVSV
AIDDFGTGHS SLAYLKILPV NEVKIDRSFI KDMLTNSQDV MIVNTSIQLI HGLGFTVVAE
GVEEPEGVEI LRNLNCDIIQ GYVFSKPLKA AEFDLWFEAF NHANPSDT
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