Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1162 |
Symbol | |
ID | 7087615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1370564 |
End bp | 1371427 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643460073 |
Product | integrase family protein |
Protein accession | YP_002357100 |
Protein GI | 217972349 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCAC TTCTGCAACA ATTCCATGAT GAGATTCGTT TACGTGGTTA CTCGGCCCGT ACACGCAGTG CTTATCTGCG TGCCATCACC CAACTGCAGC ACTATGCAAA CCAACCGCTC GATAGCATTA CGGATGAGCA GCTTACGGCT TATTTCCGTT ACTTAAATCT TGAGCGACAT CATTCCAGAG CCACCTTAAA GCTACAGCTT AATGGCATTC ATTTTTTCTA TGAACATGTC CTAGGGCGCG ATTTTACGGT TCAGTTGAGT TTACCTAAAC GTCCACACAA GCTGCCGCAA TTGCTTAGCT GCCAAGATAT CGCGGCATTG CTGTGTCACT GTCAAAACCT GAAACAACGC GCTATGTTGG CGCTGTGTTA TGGTTGTGGT TTGCGTGTCA GCGAGTTAAC CCATATTAAG GTTGCTGATA TCGATGGGCA GCGGCAGTTG CTCAAAGTGT GTCAAGGGAA AGGGGCCTAC GACAGGTTGG TGATTATTTC ACCGACCTTG CTCACCCTGT TGCGTCAGTA TTGGCGAGCG TATCATCCTG TCGAATGGCT GTTTGCCTCG ACCTATCATG ATGTGGTTTA TCCGCTGCAT GAGTCGACCT TTCGTAAAGC GTTAGCGAAG GCGGCCCGCT TAGCGAGTAT CACTAAGCCA TGCAGTCCAC ACAGCCTAAG GCATGCTTAT GCGACCCATC AATTACAAGC GGGTATGCCA CTTCATCAAT TACAGGCCCA ACTTGGTCAT CACAGTATAA AGTCTACCGA GCGCTACTTG CATTGGTCGC CGGAATTAGG TCATCAAGGC TGTGACTTGC TAGCAAGTCT TGGGGGGATG CCATGGCAAC CTCCTACCAT TTAA
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Protein sequence | MSSLLQQFHD EIRLRGYSAR TRSAYLRAIT QLQHYANQPL DSITDEQLTA YFRYLNLERH HSRATLKLQL NGIHFFYEHV LGRDFTVQLS LPKRPHKLPQ LLSCQDIAAL LCHCQNLKQR AMLALCYGCG LRVSELTHIK VADIDGQRQL LKVCQGKGAY DRLVIISPTL LTLLRQYWRA YHPVEWLFAS TYHDVVYPLH ESTFRKALAK AARLASITKP CSPHSLRHAY ATHQLQAGMP LHQLQAQLGH HSIKSTERYL HWSPELGHQG CDLLASLGGM PWQPPTI
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