| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1086 |
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| Symbol | lipB |
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| ID | 7087859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 1281234 |
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| End bp | 1281887 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643459997 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_002357024 |
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| Protein GI | 217972273 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000359181 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00000877638 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGCAAGACA CGACTTTGCA CATTCGACAT CTTGGAAAAC AAGATTACGA ATCAGTGTGG
CATGCGATGC AGCATTACAC TGATACGCGC GACAGCGAAA GCCATGATGA ACTGTGGATT
GTCGAGCATC CGCCCGTGTT TACTCAAGGC CAAGCCGGCA AAAGCGAGCA TATTTTAAAT
GCTGGCGATA TTCCGGTTAT CCAAGTGGAC CGCGGCGGTC AAGTCACTTA CCACGGCCCA
GGCCAACTAG TGGTATATCC TCTTCTCGAT ATAAAACGTA GTAAAGTCGG CGTACGTCAA
CTCGTCACCC ATATAGAGCA AAGCATTGTC GATATGCTCG CCAAGTATGA CATTAACGCT
TATGCCAAGG CAGATGCGCC AGGCGTATAT GTGGATGAAC GCAAAATCGC CTCCCTAGGA
TTACGCATTC GTAAAGGCTG TTCATTCCAT GGATTAGCCC TCAATGTCGA CATGGATCTG
GCGCCATTTC GCCGCATCAA CCCTTGTGGT TATGCCGGTC TTGAAATGGC GCAATGCAAA
GCACTTGGCG GACCACAAAC CGTGATTGAA GCGGGCGAGC AACTCACCAT TACTTTTAGC
CAATTACTGG GCTATCAACA CCTAGTTCAT CATCAAGGAT TAGCAGCGTC ATGA
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| Protein sequence | MQDTTLHIRH LGKQDYESVW HAMQHYTDTR DSESHDELWI VEHPPVFTQG QAGKSEHILN
AGDIPVIQVD RGGQVTYHGP GQLVVYPLLD IKRSKVGVRQ LVTHIEQSIV DMLAKYDINA
YAKADAPGVY VDERKIASLG LRIRKGCSFH GLALNVDMDL APFRRINPCG YAGLEMAQCK
ALGGPQTVIE AGEQLTITFS QLLGYQHLVH HQGLAAS
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