| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1052 |
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| Symbol | carB |
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| ID | 7087825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1238526 |
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| End bp | 1241750 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643459963 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_002356990 |
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| Protein GI | 217972239 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG0439] Biotin carboxylase
[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000022294 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGATAT AAAGAGTATT CTTATCCTAG GCGCCGGCCC AATCGTGATT
GGTCAGGCAT GTGAATTTGA CTATTCTGGC GCACAGGCGT GTAAAGCGCT GCGTGAAGAA
GGCTACCGTG TCATTCTGGT GAACTCTAAC CCTGCCACCA TTATGACTGA CCCAGAAATG
GCCGATGCCA CTTATATCGA GCCGATTCAC TGGGAAGTGG TCCGTAACAT TATTGCTAAA
GAACGCCCAG ACGCGATTCT GCCAACCATG GGCGGCCAAA CCGCACTGAA CTGCGCATTA
GAACTCGAAG CTAAAGGCGT ACTGAAAGAA TTTAACGTCG AGATGATTGG CGCGACTGCC
GATGCCATCG ATAAAGCTGA AGACCGTAGC CGCTTTGATA AAGCGATGAA AAGTATCGGT
CTTGACTGTC CACGTGCGGG TATTGCCCAC AACATGGAAG AAGCTTACGG CGTACTCGAT
CAAGTGGGTT TCCCTTGTAT TATCCGTCCA TCCTTTACTA TGGGTGGCTC GGGCGGCGGT
ATCGCCTACA ACAAGGAAGA GTTCGAAGAG ATCTGTTCAC AGGGCTTAGA GTTATCGCCA
ACGAGTGAAC TGCTGATCGA CGAATCACTG ATCGGTTGGA AAGAATATGA GATGGAAGTG
GTACGTGACC GCAACGATAA CTGCATTATC GTCTGCGCCA TCGAAAACTT CGATCCTATG
GGCGTGCACA CTGGCGACTC TATTACCGTT GCGCCAGCAC AAACCCTGAC TGACAAAGAA
TACCAAATCA TGCGTAACGC CTCTATGGCC GTACTGCGTG AGATTGGTGT TGAGACCGGC
GGTTCGAACG TACAGTTTGG TATCAACCCG AAAGATGGCC GTATGGTTAT CATCGAGATG
AACCCACGTG TATCACGCTC TTCAGCATTA GCATCAAAAG CAACGGGTTT CCCGATTGCG
AAAATCGCCG CTAAGTTAGC AGTTGGTTTC ACCCTTGATG AGCTGATGAA CGACATCACT
GGCGGTCGCA CGCCTGCGTC ATTCGAACCT GCTATCGATT ACGTTGTGAC TAAAGTGCCA
CGCTTTAACT TTGAAAAGTT TGCTGGCGCC AATGATCGCT TAACCACACA GATGAAGTCT
GTGGGTGAAG TGATGGCGAT TGGCCGTACT TTCCAAGAGT CACTGCAAAA AGCCTTACGT
GGTTTAGAAG TTAACCGTAA CGGTTTAGAC CCTATCACTG ACATGTCTAA GCCTGAAGCG
ATGGCGCGTA TTCGCCTTGA GCTTAAAGAG CCTGGCTGCG ACCGTATTTG GTACATAGCC
GATGCGATGC GTGCGGGGCT GAGCTTAGAT GAAATCTTTA AGCTGACCAA TATCGACCCT
TGGTTCCTCG TACAAATCGA AGAGCTGGTT CAGCTTGAAG GCGTAGTAGC TGACGCGGGT
CTGGCGGGTC TGGATATCGA CTTACTGCGC AAACTGAAAC GTAAAGGTTT TGCTGATGCG
CGTTTGGCCG ATGTATTAGG CGTGAACGAA GCCGAAGTGC GTAAGCTGCG TGACAAGTTT
GACCTGCACC CAGTCTACAA GCGTGTGGAT ACCTGTGCGG CTGAGTTTGC AACAGACACA
GCTTACATGT ACTCAACGTA CGAAGAAGAA TGTGAAGCTA ACCCATCGAC CCGTGACAAA
ATCATGGTGT TAGGTGGCGG GCCAAACCGT ATCGGTCAAG GTATCGAGTT CGATTATTGC
TGTGTACACG CGGCGTTAGC GCTACGTGAA GACGGTTATG AAACCATCAT GGTGAACTGT
AACCCTGAAA CCGTTTCAAC CGACTACGAC ACTTCAGACC GTCTGTACTT CGAACCCGTC
ACACTGGAAG ACGTTTTAGA AATCGTCCGC ATCGAGAAGC CAAAAGGCGT TATCGTACAG
TACGGTGGTC AAACACCATT GAAATTGGCC CGTGCCTTAG AAGCCGCTGG CGTACCTGTC
ATTGGTACTA GCCCAGATGC AATCGACCGC GCCGAAGACC GTGAGCGTTT CCAGCAAGCG
ATTCAACGCT TAGAGATGAA GCAGCCTGAA AATGATACCG TGACTACGGT TGAAGGTGCT
GTGATTGCCG CTGAGCGTAT CGGTTATCCG CTAGTTGTGC GTCCATCCTA TGTACTGGGC
GGCCGCGCGA TGGAAATCGT CTACGACAAG CAAGATTTGC TGCGTTACTT CAACGAAGCC
GTCAGCGTAT CGAATGCGTC GCCAGTACTG CTCGATCGCT TCTTAGATGA TGCGATTGAA
GTGGATATTG ATGCAGTATG TGACGGTGAA ATCGTGGTAA TTGGCGCGAT TATGGAGCAT
ATCGAACAAG CGGGTGTTCA CTCAGGTGAC TCAGGTTGTT CGCTTCCACC GTACACGCTA
AGCCAAGAAA TCCAAGATCG CATGCGCGTT CAAGTCGGCA AGTTGGCGAT GGAACTCGGT
GTTGTTGGCC TGATGAACGT ACAGTTCGCC GTGAAAGATA ACGAAATCTA TATGATTGAA
GTTAACCCAC GTGCTGCCCG TACTGTGCCA TTTGTGTCTA AAGCAACAGG TGTGCCTTTA
GCTAAGATTG CCGCGCGTGT GATGGCGGGT CAAAGCTTAA CGTCGCAAAA CTTCACTAAA
GAAGTGATCC CACCTTTCTA CTCAGTGAAA GAAGTGGTGT TGCCATTTAA CAAGTTCCCG
GGTGTTGACC CACTGTTAGG CCCAGAAATG CGCTCTACCG GTGAAGTCAT GGGCGTGGGC
GATACGTTCG CCGAAGCCTA TGCCAAGGCG CAGTTAGGTG CCACTTCTGA AGTGCCTAAG
TCGGGTCGTG CATTATTGTC TGTGCGTAAC AGCGATAAGA AACGCGTTGC CGATTTAGCG
GCTAAGTTAA TCGAGCTCGG TTACCAAATC GATGCCACTC ACGGTACTGC GATTATCCTT
GGCGAAGCGG GTATCAACCC ACGTCTAGTG AACAAGGTAC ACGAAGGTCG TCCACACATT
CTCGATCGCA TCAAGAATGG TGAATACACT TATATCGTGA ACACTACCGA AGGTCGCCAA
GCGATTGAAG ATTCTCGTCA ATTGCGCCGC GGTGCACTGC GTTACAAAGT TAACTACACG
ACGACCATGA ACGCTGCATT CGCCACTTGT ATGGCCCATG CCGCTGATGA CCGTACTAAC
GTGACGTCAG TACAAGAACT GCATTTACGC GTACTGGCTA AATAA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADATYIEPIH WEVVRNIIAK ERPDAILPTM GGQTALNCAL ELEAKGVLKE FNVEMIGATA
DAIDKAEDRS RFDKAMKSIG LDCPRAGIAH NMEEAYGVLD QVGFPCIIRP SFTMGGSGGG
IAYNKEEFEE ICSQGLELSP TSELLIDESL IGWKEYEMEV VRDRNDNCII VCAIENFDPM
GVHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFGINP KDGRMVIIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGF TLDELMNDIT GGRTPASFEP AIDYVVTKVP
RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT FQESLQKALR GLEVNRNGLD PITDMSKPEA
MARIRLELKE PGCDRIWYIA DAMRAGLSLD EIFKLTNIDP WFLVQIEELV QLEGVVADAG
LAGLDIDLLR KLKRKGFADA RLADVLGVNE AEVRKLRDKF DLHPVYKRVD TCAAEFATDT
AYMYSTYEEE CEANPSTRDK IMVLGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC
NPETVSTDYD TSDRLYFEPV TLEDVLEIVR IEKPKGVIVQ YGGQTPLKLA RALEAAGVPV
IGTSPDAIDR AEDRERFQQA IQRLEMKQPE NDTVTTVEGA VIAAERIGYP LVVRPSYVLG
GRAMEIVYDK QDLLRYFNEA VSVSNASPVL LDRFLDDAIE VDIDAVCDGE IVVIGAIMEH
IEQAGVHSGD SGCSLPPYTL SQEIQDRMRV QVGKLAMELG VVGLMNVQFA VKDNEIYMIE
VNPRAARTVP FVSKATGVPL AKIAARVMAG QSLTSQNFTK EVIPPFYSVK EVVLPFNKFP
GVDPLLGPEM RSTGEVMGVG DTFAEAYAKA QLGATSEVPK SGRALLSVRN SDKKRVADLA
AKLIELGYQI DATHGTAIIL GEAGINPRLV NKVHEGRPHI LDRIKNGEYT YIVNTTEGRQ
AIEDSRQLRR GALRYKVNYT TTMNAAFATC MAHAADDRTN VTSVQELHLR VLAK
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