Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0995 |
Symbol | metH |
ID | 7086466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1173421 |
End bp | 1177155 |
Gene Length | 3735 bp |
Protein Length | 1244 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643459907 |
Product | B12-dependent methionine synthase |
Protein accession | YP_002356934 |
Protein GI | 217972183 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0391552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATAC CCTCTACCAA AGCCGGCCAG ATATTGGCAG ACATTCGTAA ACAGCTTGCT GCACGCATTC TAATCTTAGA CGGTGCCATG GGCACAATGA TCCAAGACCA CAAGCTCGAA GAAGAGGATT ATCGCGGCGA ACGCTTTAAA GATTGGCACA CTGACGTCAA AGGCAACAAC GATTTATTGG TGTTGTCGCA ACCCCAGATC ATCAAACAGA TTCACACCGA CTACTTAAAC GCCGGTGCCG ACATCATTGA AACCAACACC TTTAATGCTA CTACTATCGC CATGGCCGAC TACGACATGC AGTCGCTGTC CGCCGAAATT AACTTAGCCG GCGCCCGCCT CGCCCGTGAA GCCTGTGATG AAGTGTTTGC TGCTACGGGC ATTCCACGCT ACGTCGCCGG TGTGTTAGGC CCCACTAATC GTACGTGTTC GATTAGCCCA GATGTGAATG ACCCAGGCTA CCGCAACGTC AGCTTCGATG AGTTAGTGAG CGCTTACCGA GAATCCACTA AGGCGCTGAT TGAAGGCGGC GCGGATATCA TTATGGTCGA GACCATATTC GATACCTTAA ATGCCAAAGC CGCACTGTTT GCTATTGAAT CGGTATTTGA TGACTTATTT GGTCAGCATT CTAAAGACAG ATTGCCAATC ATGATTTCGG GCACCATTAC CGATGCCTCA GGCCGTACCC TTACCGGTCA AACGACCGAA GCCTTTTATA ATTCCCTGCG CCATATCAAG CCGTTATCTA TCGGTCTTAA CTGTGCGCTC GGACCAAAAG AGCTGCGCCC GTACGTCGAA GAATTATCCC GTATAGCCGA ATGTTATGTG TCGGCGCATC CGAACGCGGG CCTGCCGAAC GAGTTTGGCG GCTACGATGA AACCCCAGAG GACATGGCAA ACGTAATTGA AGATTGGGCG CGCGAAGGCA TGCTCAATAT TATCGGTGGT TGCTGTGGTA GTACGCCTGA ACATATCCGC GTTATTCGCG AAGCGGTCGA CAGACATAAC CCGCGCGTGT TGCCCGATAT CCCCGTCGCT TGCCGCTTAG CCGGTTTGGA ACCGCTGACT ATCGACGCCC AATCCCTGTT CGTTAACGTG GGTGAGCGCA CCAACGTCAC AGGTTCGGCC AAGTTTTTAA AGCTGATCAA AGACGGTAAG TTTGAGCAAG CGCTCGATGT CGCTCGCGAG CAGGTCGAGA GCGGCGCGCA GATCATCGAC ATCAACATGG ACGAAGGCAT GCTCGATGGC GCCGAGATCA TGCACAAGTT TTTAAACTTG ATAGCCTCTG AGCCCGACAT CAGCCGCGTG CCGATTATGA TCGACTCCTC TAAGTGGGAA GTGATCGAAG CTGGCCTCAA ATGCATTCAA GGCAAGGGCA TAGTTAACTC GATTTCCCTT AAAGAAGGCG AAGCCAAGTT TATTGAGCAA GCAACACTGG TGAAACGCTA CGGCGCGGCG GCCATTATCA TGGCGTTCGA CGAACAAGGT CAGGCCGATA CTAAGGCACG TAAAATCGAA ATCTGTACCC GCGCCTACCG CGTGCTGGTC GACAAGGTCG GCTTTCCGCC AGAAGACATC ATCTTCGACC CGAACATTTT TGCCATCGCC ACCGGTATCG ATGAACACGA CAACTATGCC GTCGATTTTA TTGATGCCAT TAAAGCAATT AAAGCCACCC TGCCCCATGC AATGATTTCG GGCGGCGTGT CGAACGTGTC GTTCTCGTTT CGCGGTAACA ACCCAGTGCG CGAAGCAATT CACGCGGTAT TCCTGTACCA CGCCATCAAA GTCGGCATGG ACATGGGGAT TGTCAACGCG GGCCAATTAG CCATTTACGA CGATATCGAT CCTGAACTTA AAGTGCGGGT CGAAAACGTG GTGCTTAACT TGCCCTGCCC AGTCGAAGGC TCAAGCAATA CCGAGCAGTT ACTTGAAATC GCGGAGAAAT TCCGCGGTGA TGGCGCACAG GTCGGTAAGA AAGAAGATTT AGAATGGCGC AGCTGGCCAG TGAGCCAACG CTTATCCCAT GCGCTCGTCA AAGGCATTAC CGAATTTATC GATGAAGATA CCGAAGCCGC TCGCCAAGAG GCGAAACGTC CACTGGATGT GATTGAAGGC GCCTTGATGG ATGGCATGAA CGTGGTCGGC GACTTGTTCG GCTCGGGCAA GATGTTCTTG CCGCAGGTGG TGAAATCGGC GCGAGTAATG AAAAAAGCCG TGGCTTACTT AAACCCCTAT ATCGAGCTGG AAAAGGTCGA AGGCCAATCT AACGGCAAGA TCTTGATGGT GACGGTAAAA GGTGACGTGC ACGATATCGG CAAAAATATC GTCGGCGTGG TGCTCGCCTG TAACGGTTTT GAGGTATTCG ATTTAGGTGT GATGGTGTCG GTGGAGCGAA TTCTCGACGC CGTGAAAGAA CACAATATCG ATATCATCGG CATGTCGGGC CTAATCACGC CGAGTCTGGA CGAGATGGTG CATAACGTGA AAACCTTCCA CCGCGAAGGC TTAACCATTC CGGCGATTAT CGGCGGTGCG ACTTGCTCTA AAATCCACAC AGCGGTGAAA ATTGCGCCCC ATTATCCCCA TGGTGCTATT TATATCGCCG ATGCGTCCCG CGCCGTGCCT ATGGTGAGTA AGCTCATCAA CAACGAGACC CGCCAAGCGA CCATAGACGA AGCCTATGCC GAATACGACG ACATGCGCAC TAAGCGTTTA TCCCAAGCCA AGCGCAAAGA GATAGTGTCA CTCGAAGCGG CCCGTGAAAA CCGCTGCCAA CACGATTGGG CCAACTACAC CCCGTTCACG CCAAATGTGC TCGGTCGCCA AGTCTTTGAT AATTATCCGT TAGAAGACTT AGTCGAGCGT ATCGACTGGA CACCGTTTTT CCGCTCGTGG GAACTGCATG GCCATTACCC CGAAATCCTC ACCGATAAAG TGGTCGGTGA AGAAGCACAA AAGCTGTTCG CCGATGGTCA GGCCATGCTC AAGCAAATCA TCGAAGAAAA GTGGCTCACG GCGAAAGCGG TTATTGGCTT ATTCCCTGCC AATACCGTCA ATTACGACGA CATTGAGCTG TATACCGATG AGTCGCGCAT CACAGTTGAA ATGACCACAC ATCACCTGCG GATGCAGCTT GAGCGTGTCG GCAACGATAA CTTCTGTCTA TCTGACTTTG TTGCACCAAA AGACTCTGGC GTCGCCGATT ACATGGGCGG CTTTGCGGTG ACTACAGGCC ACGGCATAGA CGAACATGTG GCACGTTTTG AAGCCAACCA CGACGACTAC AACGCCATCA TGCTCAAGTG CTTAGCCGAC CGTTTGGCCG AAGCCTTTGC CGAGCGGATG CACGAGCGGG TACGTAAAGA GTTTTGGGGT TATGCGGCCG ATGAGCAGTT AAGCAACGAA GCCTTAATCC GCGAGAAATA CAAAGGTATA CGCCCCGCAC CCGGTTACCC AGCATGCCCA GATCACACAG AAAAAGGCTT GTTATGGGAC TTGCTCAAGC CCGATGAAAC CATCGACTTG AACATCACCG AAAGCTACGC CATGTTCCCC ACAGCGGCAG TATCGGGCTG GTATTTCGCC CACCCGAAAT CCCGCTACTT TGGCGTGAGT AACATAGGCC GCGATCAAGT GGAAGATTAT GCCAAGCGTA AAGGGATGAC TGTAGCAGAA ACGGAGAAGT GGCTGGCGCC AGTGTTGGAT TATGACCCTG AATAG
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Protein sequence | MTIPSTKAGQ ILADIRKQLA ARILILDGAM GTMIQDHKLE EEDYRGERFK DWHTDVKGNN DLLVLSQPQI IKQIHTDYLN AGADIIETNT FNATTIAMAD YDMQSLSAEI NLAGARLARE ACDEVFAATG IPRYVAGVLG PTNRTCSISP DVNDPGYRNV SFDELVSAYR ESTKALIEGG ADIIMVETIF DTLNAKAALF AIESVFDDLF GQHSKDRLPI MISGTITDAS GRTLTGQTTE AFYNSLRHIK PLSIGLNCAL GPKELRPYVE ELSRIAECYV SAHPNAGLPN EFGGYDETPE DMANVIEDWA REGMLNIIGG CCGSTPEHIR VIREAVDRHN PRVLPDIPVA CRLAGLEPLT IDAQSLFVNV GERTNVTGSA KFLKLIKDGK FEQALDVARE QVESGAQIID INMDEGMLDG AEIMHKFLNL IASEPDISRV PIMIDSSKWE VIEAGLKCIQ GKGIVNSISL KEGEAKFIEQ ATLVKRYGAA AIIMAFDEQG QADTKARKIE ICTRAYRVLV DKVGFPPEDI IFDPNIFAIA TGIDEHDNYA VDFIDAIKAI KATLPHAMIS GGVSNVSFSF RGNNPVREAI HAVFLYHAIK VGMDMGIVNA GQLAIYDDID PELKVRVENV VLNLPCPVEG SSNTEQLLEI AEKFRGDGAQ VGKKEDLEWR SWPVSQRLSH ALVKGITEFI DEDTEAARQE AKRPLDVIEG ALMDGMNVVG DLFGSGKMFL PQVVKSARVM KKAVAYLNPY IELEKVEGQS NGKILMVTVK GDVHDIGKNI VGVVLACNGF EVFDLGVMVS VERILDAVKE HNIDIIGMSG LITPSLDEMV HNVKTFHREG LTIPAIIGGA TCSKIHTAVK IAPHYPHGAI YIADASRAVP MVSKLINNET RQATIDEAYA EYDDMRTKRL SQAKRKEIVS LEAARENRCQ HDWANYTPFT PNVLGRQVFD NYPLEDLVER IDWTPFFRSW ELHGHYPEIL TDKVVGEEAQ KLFADGQAML KQIIEEKWLT AKAVIGLFPA NTVNYDDIEL YTDESRITVE MTTHHLRMQL ERVGNDNFCL SDFVAPKDSG VADYMGGFAV TTGHGIDEHV ARFEANHDDY NAIMLKCLAD RLAEAFAERM HERVRKEFWG YAADEQLSNE ALIREKYKGI RPAPGYPACP DHTEKGLLWD LLKPDETIDL NITESYAMFP TAAVSGWYFA HPKSRYFGVS NIGRDQVEDY AKRKGMTVAE TEKWLAPVLD YDPE
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