Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0974 |
Symbol | |
ID | 7086445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1143668 |
End bp | 1144558 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643459888 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002356915 |
Protein GI | 217972164 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.966458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTCA AAGTTATTCG CTATTTTATC GAAATCGTCG ATGCCGGAGG CTTTGGTAAA GCCAGCGAAA AAGTCCATCT CACCCAACCT GCGTTATCAA AAGCCGTGCG CCAGTTAGAA CAAGAACTCG ATCTCACCTT GCTTGAGCGC GGTAAACGCG GCACCCAAGT TAAACTCACT CCCGCAGGCG AAGTCGTTTA TCGACACGGT AAAGACCTGC TCGCAGGGCG GCAACGCATG CTCGCCGAAC TCACGGCGCA GCGCAGCTTA ACTGCGGGCG AACTCAATCT GGGATTAGCG CCGCTCGGCA GCGCCGAGAT TTTTGCCCCC ATTATTGCCA AGTATCGCCA GCAATATCCG CAAATTGATA TGCACTTGCT CGTCCGTGGC GGTGTAGAAC AAACCTCGGC GATCCAAAAA GGTGAGATTG AACTGGCCAC AGGGATTATC GATTTTGATG ACGGCTATGA TGGTATTCGC GTGTTTAACG ATCCTATGGT AGTGGTGCTT CCCAAGGAAA ATCCGTTATC CACCCGACAG ATATTGTCGT TTAGCGATCT CAGCGCCGAT CCTCAAGTGA TGTTCGAAAC CGAATACACC CTCTACCAAT TAGTGCTCAA TGCCTGCCGA CACGCCGGAT TTGTCCCTAA AAACATCACC CGCGTTAGCC AAGCCGATTT CGGGATTGCC TTAGTCGCGG CGGGCACTGG GGTGATGGTA TTGCCGCGCT CCATCGCGCG GCGCTACAGT GTACCCGGCG TCGTGAATAT CCCGCTGGCG AGTGACGAGC TGCGCTGGGA GCTATCGCTC TTTTGGCGCA AAGACCAAGT ATTGTCCTTT GCAGCTCAAG CCATGATCGC TTTAGTCGAG AAGCACTTAA CTCATAAGTG A
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Protein sequence | MDLKVIRYFI EIVDAGGFGK ASEKVHLTQP ALSKAVRQLE QELDLTLLER GKRGTQVKLT PAGEVVYRHG KDLLAGRQRM LAELTAQRSL TAGELNLGLA PLGSAEIFAP IIAKYRQQYP QIDMHLLVRG GVEQTSAIQK GEIELATGII DFDDGYDGIR VFNDPMVVVL PKENPLSTRQ ILSFSDLSAD PQVMFETEYT LYQLVLNACR HAGFVPKNIT RVSQADFGIA LVAAGTGVMV LPRSIARRYS VPGVVNIPLA SDELRWELSL FWRKDQVLSF AAQAMIALVE KHLTHK
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