| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0928 |
|---|
| Symbol | |
|---|
| ID | 7087289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1088406 |
|---|
| End bp | 1090019 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643459842 |
|---|
| Product | signal transduction histidine kinase regulating citrate/malate metabolism |
|---|
| Protein accession | YP_002356869 |
|---|
| Protein GI | 217972118 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGCC CTAAGCGCTT AGAAACGTGG TTAATCAGTG GGGTGACTTG CCTGAGTTTG
TTGCTGTGCG CCTTATTTGG CGGCATCAGC TATCAAATTT TGAGTCGCAG TATTACTGAG
CAATCGGGCG CTAAGGCATT AGGGCTGGCC CATGCAGTCG CGACACGGAC CGATGTGATT
ACCGCTTTGC AAACGGGGCA TTCAAGTCCC CAATTACTGG CCGCGATAGA AGGGATCCGT
CTAGCGTCTA AGGCCGATTT TATCGTGGTG GGCGATACTC ATAAATACCG TATCGTGCAC
CCAGATTCAG ATAAAATTGG CAAGAAGATG GAGGGCGGTG ACAGCCAAGC GGCATTAGAA
GGGGAGTCTT ATATCTCCGA GGCGCAGGGC AGTTTAGGTC GCTCTATTCG CGGTAAAGTG
CCAGTGCTTG ACGAGCAAGG TCAAATAATC GGCTTGGTTT CCGTGGGCTT TTTGAGCCAG
TCCGTGGGCG CGTTAATCGA TAAGCGTATT CCTGAAATCA TCATGACAGT CCTAGGAGTG
TTATTGATGG GCGTGCTGGT GGCTTTTTGG ATGGGACGGC AAGTACGGGA AATGTTGTTC
GGCTTGCAAC CTGCTGAAAT TGGGCGTTTA TTTGTCGAGC AGGACGCGAT TCTTAACACA
GTGCGAATGG GTGTGGTGGC ATTGGATGCC GATGGTCGTA TCCGCAAGTT GAACCAAAGG
GCGCGGGAGA TCTTAGCTTT ATCTCCGACC TGCCAACCTA ATACTCTGAT GTTGAGTGAT
TTATTGCCGC AGCACGCCGA CTTTCTACTG ACGAACCAAA ACAAAACCAT CAGGGGATTC
GAGTTATTTG CCAATGAGCA ATGGCTGGTG ATGTCGCGGG TGCCGTTTCA GGTACGGGAT
CAAAATGATG GCTTACTACT GACGATGCGC CCCGCCGATG AAATTGAGCG CTTGAGCCAA
CAACTGGCAA AAGTACAAGA GTTTGCCGAA ATGCTCAGAG TGCAAACCCA TGATTACTCG
AATAAACTCC ATACTCTAGG CGCCTTGTTG CAACTTAAAG CCTACGACAA AGCGGTCGAA
TTTATCGGCC AAGAAAGCCA AGGTTGGCAG GCTCAAATCC ATTTATTACT GTCGCAAATC
CATGAGCCGA CGATCGCGGG ATTACTCTTG GGTAAGTATC ACAAGGCGAA AGAGCTCAAT
ATTGAGTTTC AAATCAGCCC AGATAGTCAA CTCAGCGATG TGCAAGACGC CATTATGCTT
GAGCGGATGG TGTCGATTAT GGGCAACCTT ATCGATAACG CCATTGAGGC TGTGCACAGG
GCGAACAATC ATAAGCCCCG CTGCGTGGTC GTGACCTTAG ATGAAACTGC CTCTAACCTG
ATTTTTGATG TGGAAGACAG TGGCGATGGG ATTTCTAAAA CCGAGTACAG TACGATATTC
GATCCAGATT ACAGCTCTAA GCAGGGGGCG CAGCACGGTG TGGGCATGTA TATCGTTAAT
ACTTACCTGT GTGCCTGCCA TGGCAGCTTA GAGTTTGCCG ACTCAGATTT AGGTGGAGCG
CGTTTTTCTG TGTATATTCC CACTAAACCT TTACCTGAAG TAGGTACCGT TTAA
|
|---|
| Protein sequence | MRRPKRLETW LISGVTCLSL LLCALFGGIS YQILSRSITE QSGAKALGLA HAVATRTDVI
TALQTGHSSP QLLAAIEGIR LASKADFIVV GDTHKYRIVH PDSDKIGKKM EGGDSQAALE
GESYISEAQG SLGRSIRGKV PVLDEQGQII GLVSVGFLSQ SVGALIDKRI PEIIMTVLGV
LLMGVLVAFW MGRQVREMLF GLQPAEIGRL FVEQDAILNT VRMGVVALDA DGRIRKLNQR
AREILALSPT CQPNTLMLSD LLPQHADFLL TNQNKTIRGF ELFANEQWLV MSRVPFQVRD
QNDGLLLTMR PADEIERLSQ QLAKVQEFAE MLRVQTHDYS NKLHTLGALL QLKAYDKAVE
FIGQESQGWQ AQIHLLLSQI HEPTIAGLLL GKYHKAKELN IEFQISPDSQ LSDVQDAIML
ERMVSIMGNL IDNAIEAVHR ANNHKPRCVV VTLDETASNL IFDVEDSGDG ISKTEYSTIF
DPDYSSKQGA QHGVGMYIVN TYLCACHGSL EFADSDLGGA RFSVYIPTKP LPEVGTV
|
|---|
| |