| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0918 |
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| Symbol | |
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| ID | 7087279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1075497 |
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| End bp | 1076468 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643459832 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_002356859 |
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| Protein GI | 217972108 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTAC CTACTATCCC TGAAAACGAG CTGCAACGTT TGGCCACGTT ACGCGCACTC
AATGTGCTCG ACACCGATGC CGAGGAACGT TTCGATCGTA TTACTCGGCT CACACGCAGA
ATTTTTTCTT TGCCGATTTG TGTTGTGACC TTAGTGGATG CCGAGCGGCA GTGGTTTAAA
TCTCGCCAAG GATTAGAGGT GACTGAAACA CCACGGGAAA TTTCATTTTG TGGCCATGCG
ATCAATCAAG ACGATATTTT TATCGTAAAC GACGCCCTTA AAGATCCGCG CTTTAGTGAC
AATCCTCTGG TGACTGAGCA GCCACATATT CGCTTTTACG CTGGCTATCC CTTAACCATT
CATAGGCAAT ATCGGGTCGG GACCTTGTGT TTAATCGGCA CTGAACCGCG AGAGTTTACG
GCTGAAGATA TTGAAACCTT GACGGATTTA GGCGAAATGG TGGAGGCGGA ATTACTCTCT
ATCGCGCAAA ACACCTTAGA TCCTTTGACC ACGATTTCGA ATCGGCGTGG ATTTGAGTTA
CTGGCCCATC AGGCGCTGGC GAGTTGTCGA CGTACCGAAT CTGAGGCGGC CTTACTCTTC
TTCGATCTCG ATTTCTTTAA GGAAGTGAAT GACAACTTTG GTCACCTCAA GGGCGACCAA
GTGTTATACG ATTTTGCCCA TATCTTGATG ACCGCTTTTA GGGAGTCGGA TGTGATTGCA
AGGCTTGGCG GTGATGAGTT TGTGGTGCTA TTAAGTTTTG TGCATAGAGA TACAGTCGAT
CGCGTGATTG AGCGTTTTAA GCAATTACTT GAGCAATATA ATCAACAGCA TCCTAAGCAA
CATAGCTTAG CGACCAGTAT TGGTATCGCC CATTGGACGC CAGATTCTGA TGTGAGCTTA
GAGGATCTGT TAGATTCCGC CGATAAAGCC ATGTATCAGG ATAAAGCCGC GCACCACAGT
GATGCGCCTT AA
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| Protein sequence | MQLPTIPENE LQRLATLRAL NVLDTDAEER FDRITRLTRR IFSLPICVVT LVDAERQWFK
SRQGLEVTET PREISFCGHA INQDDIFIVN DALKDPRFSD NPLVTEQPHI RFYAGYPLTI
HRQYRVGTLC LIGTEPREFT AEDIETLTDL GEMVEAELLS IAQNTLDPLT TISNRRGFEL
LAHQALASCR RTESEAALLF FDLDFFKEVN DNFGHLKGDQ VLYDFAHILM TAFRESDVIA
RLGGDEFVVL LSFVHRDTVD RVIERFKQLL EQYNQQHPKQ HSLATSIGIA HWTPDSDVSL
EDLLDSADKA MYQDKAAHHS DAP
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