Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0893 |
Symbol | |
ID | 7087254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1042775 |
End bp | 1044184 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643459807 |
Product | ATP-dependent RNA helicase DbpA |
Protein accession | YP_002356834 |
Protein GI | 217972083 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGCAACT CTGATACTAA GCCTAATCCA TCAATGGCTT TTTCGACTCT TAAGCTAAAA CCCGAACTGC TTGAGAACCT TTCTTCTATG GGCTACAACG AGATGACGCC AATTCAGGCG CAAAGTTTGC CACCCATTTT AGCGGGGCAG GATGTGATAG GTCAGGGTAA AACTGGCTCG GGTAAAACGG CCGCCTTCGG CTTAGGATTA CTGAACAAGT TAGACGTTAA ACGCTTTCGT ATTCAAACTT TAGTATTATG CCCAACCCGC GAGTTGGCCG ACCAAGTGGC GCAGGAAATC CGTACCCTTG CCCGTGGTAT TCATAACGTT AAAGTACTGA CACTTTGCGG CGGCGTGCCT ATGGGGCCAC AGGTTGGCTC TCTGGAACAC GGCGCACACA TTATTGTGGG TACGCCTGGT CGTATCGTCG ATCACTTAGA TCGCAATCGC TTAGATTTAA GCAATCTCAA CATGTTAGTA CTCGATGAAG CCGATCGCAT GTTAGAAATG GGTTTCCAAC CCGCCCTCGA TGCGATCATC GAACAAGCGC CACGTGAGCG TCAGACGTTG CTATTCAGCG CGACGTTCCC GGAGCAAATT CAATCGATTG CTAAGCAAAT CATGTATGAC CCAAGCATGG TTAAAGTTGA AGGTAATCAC GACAGCTTGA GCATAGCCCA ACATTTTTAT CATTTAGACG ATGACAAGGC GCGTATGCAA GCGCTGCAAT TATTGTTGTT AGAACATAAG CCTGAAAGCG CAGTGGTGTT CTGTAACACT AAACGCGAAA CCCAAAAAGT GGCCGATGAG CTTGAAGGCT TAGGCTTTAG CGTATTGGCT TTGCACGGTG ATTTAGAGCA AAGAGACAGG GACGAAACCT TGCTGCAATT TGCTAATAAG AGTGCCTGTG TATTAGTGGC GACCGACGTT GCCGCCCGTG GTTTAGATAT CGATGCGCTG GATGCCGTGT TTAACTATCA CGTTGCCTAC GACACCGAAG TCCACATTCA CCGTATCGGT CGTACTGGCC GTGCGGGCAG TAAAGGCGCC GCTTATACCT TCTATAACGA TCAAGACGGT TACAAAATTG CCTTGTTAGA AGAGTATTTA GAGCGCGAAA TTACCAGCGA ATCACTGCCA TCTGAAAGCC TGCTCGGCAA CACGCCTGCA GCGCCAACCA TGATCACTTT GCAGATCGAT GGCGGTAAGA AAGAAAAACT GCGTCCAGGG GATATCTTAG GCGCGCTGAC GGGCGAAAAC GGTATCGAAG GCTCACAGGT GGGTAAAATC CAAGTGACCG ATTACCGCGC CTATGTGGCC GTTAATCGTA AGGTTGCCAA GAAAGCGCTG AACAAAATTA CTGGCGGCCG CATTAAAGGA AAATCTTACC GCGCTTGGCC AATGAAGTAA
|
Protein sequence | MSNSDTKPNP SMAFSTLKLK PELLENLSSM GYNEMTPIQA QSLPPILAGQ DVIGQGKTGS GKTAAFGLGL LNKLDVKRFR IQTLVLCPTR ELADQVAQEI RTLARGIHNV KVLTLCGGVP MGPQVGSLEH GAHIIVGTPG RIVDHLDRNR LDLSNLNMLV LDEADRMLEM GFQPALDAII EQAPRERQTL LFSATFPEQI QSIAKQIMYD PSMVKVEGNH DSLSIAQHFY HLDDDKARMQ ALQLLLLEHK PESAVVFCNT KRETQKVADE LEGLGFSVLA LHGDLEQRDR DETLLQFANK SACVLVATDV AARGLDIDAL DAVFNYHVAY DTEVHIHRIG RTGRAGSKGA AYTFYNDQDG YKIALLEEYL EREITSESLP SESLLGNTPA APTMITLQID GGKKEKLRPG DILGALTGEN GIEGSQVGKI QVTDYRAYVA VNRKVAKKAL NKITGGRIKG KSYRAWPMK
|
| |