Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0892 |
Symbol | |
ID | 7087253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1041634 |
End bp | 1042491 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643459806 |
Product | Pirin domain protein |
Protein accession | YP_002356833 |
Protein GI | 217972082 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAT TAAGTCAGTT TTCCGCCAAA GCCGCGATGG ATGGCGATGG GGTCAATATT CGCCGTGTCG CCGATTTTGT GACGACTAAA TTTGATCCTT TCTTGATGAT CGACGAAATA AAATCCGATG ATGAACAAGA CTTTATCGGT GGCTTCCCCG CACATCCCCA TCGCGGAATG GAGACCTTTA CTTATATTCG TAAGGGCGGT TTTGAGCACC GTGACCAAAT GGGCAATGTG AAGGCGATTC GTGCCGGCGA TGTGCAGTGG ATGAGTACCG GGTTCGGGGT AGTGCATTCT GAAATGCCAC TTGCCGATGC TGTCGATGGT CTGCATGGAT TCCAAATTTG GGTCAACATG CCCGCCAAAG ACAAGCTGCG TCCAGCTAAG TATCAAGATA CTGCGGGTAG CGCTAGCGTT GAAGCGACCA ATAACACTGG TGCTAGCTTA AAAGCCTTAG CAGGTGATTG GGGCTTTAAA GATCAACCAC TGATTAGTGC GGCTATACAA GGATTAGCGG GTGAGGCTGC CATTGCTGAT TTGAGCCTAG CGCCAAACAC TGAGGCCACG CTTGATTTGT CTCAACATGA GTTTGTCGCC TTGTACTTGT ACCAAGGTGA CTTAAGTAAA GGTGAAGATT CACTGCGGTC ATATCATGAG GGCGAGTTTT TAGTGCTTGA TAGCCAAAGT GTGCTTAAGC TTAAAGCCGA TGAGCGCGGC GCTGGGATGT TACTGTTTGC GGGTAAACCT ATCCGTGAAA AAATCGTCCA GATGGGTCCA TTTGTAATGA ACACCCAAGC GGAAATTCAG CAGGCGATTC GCGATTATCA AGAAGGGCGT TTCGGCCACA TCGCGTAA
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Protein sequence | MKVLSQFSAK AAMDGDGVNI RRVADFVTTK FDPFLMIDEI KSDDEQDFIG GFPAHPHRGM ETFTYIRKGG FEHRDQMGNV KAIRAGDVQW MSTGFGVVHS EMPLADAVDG LHGFQIWVNM PAKDKLRPAK YQDTAGSASV EATNNTGASL KALAGDWGFK DQPLISAAIQ GLAGEAAIAD LSLAPNTEAT LDLSQHEFVA LYLYQGDLSK GEDSLRSYHE GEFLVLDSQS VLKLKADERG AGMLLFAGKP IREKIVQMGP FVMNTQAEIQ QAIRDYQEGR FGHIA
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