Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0856 |
Symbol | |
ID | 7088092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1001738 |
End bp | 1002448 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643459770 |
Product | ABC transporter related |
Protein accession | YP_002356797 |
Protein GI | 217972046 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGACG TCGCTAAACC AAATCCGGTC GACAAGCTTC ACCCAGTCGC CAAGCTTAAC CAAATCAGCA AGTGCTTTCG CGATGGCGAG CAATATCATC AAGTGCTGCA AGCGGTTGAC CTGCAGATCC ACAGGGGCGA AACCGTGGCG CTTACAGGCC CCAGCGGCAG CGGCAAGAGC ACCTTACTCA ACCTGATCGC CGGTTTTGAA ATGCCGGATT CGGGCGAAAT CTTACTAGAA CAAGCGTCCA CCTCAACTTG GCAAGACAAA GATTGGAGCC GTTTCAGGCG CAATTCCTTA GGTGTCGTGT TTCAGCAATT TAACTTACTC ACGCCACTTA ACGTGAAAGA TAATATCGCC TTCTCCTTAA GTTTAACCGC GCAGCCGTGG TCAGCCTGGT GTGACTATCT GGTTGAAAAA CTTGGACTGA TGCCATTACT TCACCGCCAA GTTGAAGCCC TGTCCGGCGG TCAACAACAG CGCGTAGCCA TTGCCCGCGC CTTAGCCCAT AAACCGACGT TACTGCTGGC CGACGAACCC ACAGGTAACT TAGATGATAT ATCGGGTAAG CAAGTCATGG CATTACTGTG TGAACTGGCA CGGGAAAGCC AAACCAGTAT CTTAATGGTC ACCCACAGCG AAGAGTGCGC CGCCTTTATG CAAAAACGTT GGCACTTATC CCAAGGTGCA GTCGCTATCT ATGAACAATA A
|
Protein sequence | MADVAKPNPV DKLHPVAKLN QISKCFRDGE QYHQVLQAVD LQIHRGETVA LTGPSGSGKS TLLNLIAGFE MPDSGEILLE QASTSTWQDK DWSRFRRNSL GVVFQQFNLL TPLNVKDNIA FSLSLTAQPW SAWCDYLVEK LGLMPLLHRQ VEALSGGQQQ RVAIARALAH KPTLLLADEP TGNLDDISGK QVMALLCELA RESQTSILMV THSEECAAFM QKRWHLSQGA VAIYEQ
|
| |