Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0827 |
Symbol | |
ID | 7088060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 956830 |
End bp | 958281 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643459738 |
Product | RND efflux system, outer membrane lipoprotein, NodT family |
Protein accession | YP_002356768 |
Protein GI | 217972017 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00460212 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000259986 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATACAA AAATATTTAA TCGACACTTT TCGCCTCGTA GCTGCGCGAT TGCTGTGGGC ATAGCTTTGG GAATCGCCTT GCTGAGTGGC TGTGGCAGTT TCATGCGTTC AGACTTTGAG CCGCCCGCAT TGGCGATTCC CGAACAGTGG CAAAACACCA CAGTGAACGA GCAAGTAAAA GTCGATCCTT GGTGGCAGCA GTTTCATCAG CCTGAGCTTG ATAAGCTGGT TAGCCAAGTG TTGAGCACCA ACAATGACTT AACGCTGGCG ACCTTAACCC TGCGTAAAGC GCGTTTGCAG GCAGGACTAA CACGGGATGA TCTATACCCG CAACTATCGG CCAATCTTGG TGCTTCCCGT AATCAGCCAC TCGATGGCGG CGACGCAACT AAGAGTTATC AAGCCAACTT GTCTGTCAGT TATGAGGTGG ATTTGTGGGG CAAAGTGTCG GCCAATATCG ACCAAGCCCA ATGGGCGGCG CTGGCGAGCG CCGAAGATAG GGAAAGCACC ACCCAAAGCC TAGTGGCGAC CACTGCATCC TTGTATTGGC AGATAGGATA TTTAAATCAA CGGGTTGATT TAAGCCAAAA GAGCATAGCG TACAGCAAAC AAACGCTGGC TTTAACCCAA AGGCAGTATG ATTCTGGCGC CGTTACGCAA GTGAATGTGC TCGAAGCGCA GCGCAGCATG GCGGGACAAG AGGCGGCCCA TAGTCAGCTT ATTCAGCAAT TAACTGTGGC TAAAAATGCC CTCGCGATAT TACTCAATCA GGCACCAGCT GCTGACCCAG CGCAGAGTTT AGCCTCAGGG GAGACTTGGG TTGAGATTAA ACAGCTCCCT GACGTGGCAG TGCCGGACGT TAGTGTGGGC GTACCCGCAG ATTTGTTAGT CAGACGCCCA GATGTGAAGG CTTCCTTGTA TCAACTGCGC TCCGCCTTGG CGAGTAAAGA CGCGACCTAT GCGAGTTATT TCCCAAGCCT GAGTTTAACC GGCGGTGTCG GAGAGTCGAC CTCAGAGTTA AAAGAGCTGT TACGTAATCC CGTTGGCAGT TTAGGCGCTG GGCTTGTCTT GCCCTTTTTG CAGTGGAATC AAATGCAAAT CAATAACGAA ATTGCCGATA TCGATTATCA AACTGCAGTG GTGAATTATC GCAAGACGCT TTATTCCGCC TTTGAAGATG TCGATAATGC GATTTCGGCT AAGCAGCAAT ATCGTTATCA AGGGGAGAAG TTGGCGCAGC AATTTAGCGC CGCGGCAGCC GTTGAAGCCA TTTACGAGAG TCAGTATCGC AATGGTGCTA TCGGTATTCA GAATTGGATT GATGCCCAAG AGAATCGTCG CAGCGCCGAG GCGGCTTTGC TCGAGAATCG TTACAACCAA CTCACCGCCC AAGCGATGCT TTATCAAGCC CTTGGCGGCA GCGATATCGC CCCGCCTTTG GCAAAGGAAT AA
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Protein sequence | MNTKIFNRHF SPRSCAIAVG IALGIALLSG CGSFMRSDFE PPALAIPEQW QNTTVNEQVK VDPWWQQFHQ PELDKLVSQV LSTNNDLTLA TLTLRKARLQ AGLTRDDLYP QLSANLGASR NQPLDGGDAT KSYQANLSVS YEVDLWGKVS ANIDQAQWAA LASAEDREST TQSLVATTAS LYWQIGYLNQ RVDLSQKSIA YSKQTLALTQ RQYDSGAVTQ VNVLEAQRSM AGQEAAHSQL IQQLTVAKNA LAILLNQAPA ADPAQSLASG ETWVEIKQLP DVAVPDVSVG VPADLLVRRP DVKASLYQLR SALASKDATY ASYFPSLSLT GGVGESTSEL KELLRNPVGS LGAGLVLPFL QWNQMQINNE IADIDYQTAV VNYRKTLYSA FEDVDNAISA KQQYRYQGEK LAQQFSAAAA VEAIYESQYR NGAIGIQNWI DAQENRRSAE AALLENRYNQ LTAQAMLYQA LGGSDIAPPL AKE
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