Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0608 |
Symbol | |
ID | 7089739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 710502 |
End bp | 715124 |
Gene Length | 4623 bp |
Protein Length | 1540 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643459530 |
Product | virulence plasmid 65kDa B protein |
Protein accession | YP_002356560 |
Protein GI | 217971809 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAAAA ATATTTTTAT GGGGACTAAT CCCGCTGCCG GCACTATAGT GCCTCTGAGT CTTCCTAAGG GGGGGGGGGC TGTTACTAGT ATGGGGATGG CACCAGGAAA TGTGGGGGCT GATGGTACGG CCAGTTTCAG TATTCCGCTC CCAATATCAG CTGGTCGCTC TGGTTCAACG CTCACTCCAC CCGTTGCTAT TTCTTACAAT AGTGGTGCAG GAAATGGTAT TTTCGGTCTC GGTTGGCAAT TACCGGTGAT GAGAATCTCC AGGCGAACCC GTTATGGCGT TCCCTCGTTC GATGAGTCGT CTGACGATCA GACAGATCAG TATCTGGGGC CGGATGGTGA GGTACTATTA CCCCTGCTTA ATGAGGAAGG GTTAGTTATC ATTGAGACTC GTACGACATT CCGAGAGCTC GAATTTGAAC AAGCTTATCA GGTTTGCCGA TATCAGCCAC GCGTAGAGGG GAGCTTTTCC CGCATTGAAA GATGGTGGCG AGATGGTGAG CCAGCTTCCA CATTTTGGTT AATTCATGAT GCTACGGGCC ATCTGCACTG CTTGGGTAAG ACCATTGCAG GGCGTGTTGC AAGTCCTCAG CTATTAACCG ATAGCTACAA TCCCAGAATC GGAGAATGGC TGCTTGAAGA GTCTGTCTCC CCTACGGGTG AGCATATGAT TTATTGTTAC CAGGATGAGA ATAATGTGGG TGTATCGCCT GATAAACAGT ATTCTCTTGG CACTCTGCCA CATCTGATGG AAATTCGTTA CGGCAATCTA CATCCAGCAG CCAATCTTTA TTTATGGTCG TCTGATAACG TAAACTCTGC GACCTCTGGC GTGGAATGGC TTTTCAAATT AATCTTTGAC TACGGCGCTC GTGGCCTGGA TCCCCATAGT CAACCGCAAG ACAAGATCGA GCCAGATCAA CACTGGACGG CACGACATGA TCCGTTTTCT CGTTTTGATT ATGGTTATGA AGTCCGCTGT CATCGTCTTT GCCGTCAAAT CATCATGTTT CACCAGAATT TTACAGAGTT GAATCAGGGC TGCCCTACAG TGGTAGGGCG ATTAATACTC GATTATGACG AAAATGCAGT GCTCTCGCGC TTGATTGGCG CACGACTTTG GGCATACGAT ACTGACGGTA AGCCGCAGTC ACAGCCCCCT CTTTTTTTGA ACTATACCTC ATTTGATACA TCGTCTCGTC CTGATGCTTG GCATGTGTTC CAAGGCTTGC CTAGTGTTGA TGATGGCAAT TCGTTCCAAA TGGTTGATCT ATTTGGTGAT GGCCTACCCG GTCAATTATA TAAGTCTAGC AATGGCTGGT TGTATCGGGA GCCACAACGT GCAGCTTTAA GTACTAGTGA TGAAGACGCT GTTTCTTACG GTGCATGGCA AACTCTGCCA CAATTACCGA GTATGACTAA AGTACGTACC ATGCTGATGG ACACTGATGG AAATGGTCGA CTTGATTTGG TCGTCACCCA GCCCGGTATT GCTGGTTTTT TTACGCTAAA CCCCGATAAA AGTTGGTCTA GTTTTGTCCC TTTTTCGGCG CTGCCAACTG AATTTTTCCA CCCACGTATG TTATTGGCTG ATTTGACGGG AGCAGGTCTT GCTGATCTTG TGCTAATTGG ACCGAATAGC GTACGCTTAT TTTCTAAAAA GCACCGCGGT TCTCGAGATG GGTGGGTAAG CTCTGTCGAA GTTGAACGAG ATCAACACGA CCAGTGCAAT GATTTGCCTA TAATTGGTCA AGACGAACGC AGCCTAATCG CTTTTTCAGA CCCATTTGGT ACAGGTACAC AACACTTAGT ACAAATCAGC TATGATGGTG TTTATTGTTG GCCGAACTTA GGTAGGGGGC GCTTCGGGGA AAAACGAACT ATTCCGCTAG CCAAAGAAGA TGCAGTTAAT GGGTTTGCGA GCGCAGAACA GTTTAATCCT CAACAAATTT ACCTTGCCGA TCTAGATGGT TCGGGTGCTG TTGATGTGAT CTATGTGCGT AGCACCGCTA TCGATATCTA TTTCAATCAG GCGGGTAACG GCTTTTCCAA AAAGGTAGAG TTAACAATGC CCACCGGCGT TAATTTCGAT CGACATTGCC AACTGTCTTT GGCCGATTTT GACGGAAAGG GGGTTACCAG TCTAATTTTG ACTGTGCAGC ATCCCGAAAT AAGCCACTGG CGCTACGATT TTTGTGAACA GAAGCCTTAT TTGCTTTGCG AAATAGACAA CAATATGGGA TCGCATACCC TCCTCTATTA TCGTAGTTCA GCGCAATATT GGCTGGACGA TAAAAAGCAG AAGAGGGCAA CGGCTTCCCG TTTACCTTTC CCCATTCAGA CTTTGGCCCG TGTTGAGAGC AAGGATGAAA TCAAACAGTG CACGCAAACT CATCACTATA CCTATCACTA TGGCGTATAC GATGGTGCTG AGCGAGAATT TCGAGGATTC CGTTTAGTCG AAATGTCGGA TGGCTCCATC ACAGCTCCTG CCTTAGGTGT CGAGGACACA CCGATAACTC GTACTCGTAC TTGGTATCAT ACTGGTATGG AGGGTGATGA TATGTCGCTT CCTGGAGAGC CTTGGGAAGG TGATATTAAA GCTCCTCAAA CTCTAGATAC ATTACTTACA CAATGGCAAG TTAACGAAGA CGATGGCAAA GATCAACCGT TGACTGATGC CGATCCTGAG CTGCGACGTT GGTTGAATCG TGCGCTTAAT CGGAAAGTGT TACGCCAGGA AGTCTTCGGT CAGGATGGGA GTACACAGCA AAACAAACCC TACAGTGTAT CAACAACACG CTATCAGGTT CGTTTGCTAA AAGCTGGCAA TGCAAAATCG CCACCACTGG TGCTACCATT AGCGCTGGAG CAGATGAGTT TCAACTACGA ACGTATTGTT ACTGATCCGC AAATTCGGCA CACGGTTCAA TTAGTTAGTA ATGTCTACGG TCAGCCAACC CAAAGCGTTG ACATATGCTA CCCGCGAAGA TCTTCTGCAA ACTGGGACGA GTACAAAGTG GCTTTCCCTG ATATCTTACC GGATAGCCTC AAAGACAGTT CGCGTACTTC TGAACAAAAC GTGTTGCACG TGCTGCTCAA CCAGCAGAGT TATCTGCAGT TGACTGACAA CGCTTATTGG CAATTGGGCA TACCAACCCA AAGTCGCCGT GATAAGCTAT GCCTTACTAA CACATTTATC CCTGATTATC TTAGCTACGA AGTCCTTACT AATATTCAAG GCCTATTAGA CGGACAATCT GCACGTAACT ACCTTGGCCA ACAAGAGGTT TTCTACAAAG AAAGCAAACC GACCAAGCTT CCTGTCTTAG TCGATCATAT CGAAATAGCT CAACTCGATG TTATGCAGAT GACACTTTTA GCACAGCGAA TGGGGAGTGA TTTTAATGAT ATTCTTATTC GTTCAGGGTT TGAGGCTCGC AAAAGAATTC TAAAGCCTAA AAAGGTTGAC GATGTTGTTT ATGTCGCATC GAGCGGATTT AGCACCTACG ATCCATCCCG TTTTTACCAA GTTGTTGCTC AGCAGAGTAA TCGACTAAGT GGTGTTACTC ATATTAGTTA CAACACTTAT GGCTTACCGG TCTCTATCAC TGATCCGGTT GGCAATATCA CTAAAGTCAA AAAGTACGAC TACCGCTTTA TGACGCCATG CCAAATAGAA GACATTAATG CCAACGTTCA TTGCGTAGCA CAAGATGCCT TCGGCCGCGT TATTGCAGAT TGGTATTATG GTACTGAAAA TGAAAATATT GTCGGATTCC CTGCATCCGA ACCTTCTGAT TATAGTGTCG CCAGCGTCGA ACAACTGATC GCCAAAGCCA CATTGCCAGC AAGACAACGA AACCCTATTA CTGTCGCTAG TCGGCAAGCT TTTGATTTGT TTAGTTGGAT GGGCCAGCTT CGCACCAAGG AGATCATAAA GGTTGTGGGT TTACAAGCAT TACCCCTGTT GCTCAAACAT GGTTTGATTG TGCCAAGTCA CGATGCTAAA AATATGCTGT TGACAGCCCG TATCCGCCGC TGGGCTGCTG ATAAGGCTGA CTTGTCTGGT CTTAATGAGC AAGCCGCTGT TGGATTGCGT CAACTGATAG ACAGTACGCC ACATCACCCC CCCCACAGTG TCGTTATCAG TGCTGATCGC TATCCAGAGC CTATTTATTA TAATGATCGA CAACCGCAAC AGATTGCTGC TGTGGTCTAT TATGGCAACG GTAGCGGACA GACGTTACAA ACCATTACGC TCCATGAGAC AGGTCTTAAG TGTTTACGCC CTCTCGCTGG TGAGCGCTCA ATTAATGAAA AGGTGTTCAA GTTAGAAACA GGTACTGACG ATTGTTTTGA ACGCTGGGTT GTTTCGGGTC ATATTGAGCT TGATGGTAAA GGCCAAGTCG TTCGTAGCTA TCAACCCTAT TTCGTCAATG ACTGGCGCTA CGTTATCCAC AAGCAACGAC AAGACACCGA TTATGCCGAT ACGAATTTCT ATGATGCGCT TGGTCGTCAG ATCCTTGTTG TAACCGCTTT GGGTTATTCA CGCCGGACTA GCTATACTCC TTGGTTTATT GTTGATGAAG ATGAGAATGA TATGTGCGCC TAA
|
Protein sequence | MDKNIFMGTN PAAGTIVPLS LPKGGGAVTS MGMAPGNVGA DGTASFSIPL PISAGRSGST LTPPVAISYN SGAGNGIFGL GWQLPVMRIS RRTRYGVPSF DESSDDQTDQ YLGPDGEVLL PLLNEEGLVI IETRTTFREL EFEQAYQVCR YQPRVEGSFS RIERWWRDGE PASTFWLIHD ATGHLHCLGK TIAGRVASPQ LLTDSYNPRI GEWLLEESVS PTGEHMIYCY QDENNVGVSP DKQYSLGTLP HLMEIRYGNL HPAANLYLWS SDNVNSATSG VEWLFKLIFD YGARGLDPHS QPQDKIEPDQ HWTARHDPFS RFDYGYEVRC HRLCRQIIMF HQNFTELNQG CPTVVGRLIL DYDENAVLSR LIGARLWAYD TDGKPQSQPP LFLNYTSFDT SSRPDAWHVF QGLPSVDDGN SFQMVDLFGD GLPGQLYKSS NGWLYREPQR AALSTSDEDA VSYGAWQTLP QLPSMTKVRT MLMDTDGNGR LDLVVTQPGI AGFFTLNPDK SWSSFVPFSA LPTEFFHPRM LLADLTGAGL ADLVLIGPNS VRLFSKKHRG SRDGWVSSVE VERDQHDQCN DLPIIGQDER SLIAFSDPFG TGTQHLVQIS YDGVYCWPNL GRGRFGEKRT IPLAKEDAVN GFASAEQFNP QQIYLADLDG SGAVDVIYVR STAIDIYFNQ AGNGFSKKVE LTMPTGVNFD RHCQLSLADF DGKGVTSLIL TVQHPEISHW RYDFCEQKPY LLCEIDNNMG SHTLLYYRSS AQYWLDDKKQ KRATASRLPF PIQTLARVES KDEIKQCTQT HHYTYHYGVY DGAEREFRGF RLVEMSDGSI TAPALGVEDT PITRTRTWYH TGMEGDDMSL PGEPWEGDIK APQTLDTLLT QWQVNEDDGK DQPLTDADPE LRRWLNRALN RKVLRQEVFG QDGSTQQNKP YSVSTTRYQV RLLKAGNAKS PPLVLPLALE QMSFNYERIV TDPQIRHTVQ LVSNVYGQPT QSVDICYPRR SSANWDEYKV AFPDILPDSL KDSSRTSEQN VLHVLLNQQS YLQLTDNAYW QLGIPTQSRR DKLCLTNTFI PDYLSYEVLT NIQGLLDGQS ARNYLGQQEV FYKESKPTKL PVLVDHIEIA QLDVMQMTLL AQRMGSDFND ILIRSGFEAR KRILKPKKVD DVVYVASSGF STYDPSRFYQ VVAQQSNRLS GVTHISYNTY GLPVSITDPV GNITKVKKYD YRFMTPCQIE DINANVHCVA QDAFGRVIAD WYYGTENENI VGFPASEPSD YSVASVEQLI AKATLPARQR NPITVASRQA FDLFSWMGQL RTKEIIKVVG LQALPLLLKH GLIVPSHDAK NMLLTARIRR WAADKADLSG LNEQAAVGLR QLIDSTPHHP PHSVVISADR YPEPIYYNDR QPQQIAAVVY YGNGSGQTLQ TITLHETGLK CLRPLAGERS INEKVFKLET GTDDCFERWV VSGHIELDGK GQVVRSYQPY FVNDWRYVIH KQRQDTDYAD TNFYDALGRQ ILVVTALGYS RRTSYTPWFI VDEDENDMCA
|
| |