| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0576 |
|---|
| Symbol | |
|---|
| ID | 7089307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 661576 |
|---|
| End bp | 662688 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643459503 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_002356533 |
|---|
| Protein GI | 217971782 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCACG GAAAAACGCT GCCAATCGCC TGTCTTCTTG CCCTCACTTT AGGCACATCT
CTTAGCGTGC ACGCCTCAGA AAATAGCTTT ACCAAAGCCT ATAGTGACTA TCAAGCCGCC
GTAGAAAAAG GCGATGCAGC TAAGATTGAA GCGAGCGCAA AAACCGCTTA TCAACTCGGC
GAAGCTCAAT ATGCCAAAGA CAGTGTCGAC TTAGCTAACC TCGCCTTGAA CTGGGCCAGC
GCGATAGAAA AGCAAGTCGC CCCTTACCCA TTTACAGAAA AGAATTTGCC CAAAACGGCT
AAGGCGAATG AGTTGTATCA GCTCGCTCTG GCTAACTATA AAGTTCATTA TGGCAAAAAA
GCGCTTGAGC TTATCGATCC CTTACTGGGT GCTGCACAAA CCGCCGTCGA AGCCAAAGAT
GCGAAAGAGG ATTTTCTTAC TGCAATCGCA ATTGCTGAAA AATCCGATAA AAAGAAACTG
ATCGCCGATG TAAAAATGGC AGCCTTCAAC CGCTTATCTC ATACCCAGCT ATACACCAAT
AGCGTAAGAC GCTATGCCTT CGATGCCTAT GATATTTATA AAGAGATTTT GCCAGAGAAC
GCCATAGACA GAGTCAAAGC AACCTATGTT GTTGGAGCTG TTGAATTTGT GGAAAAACAC
GATGGTAAAG CCGAACCTTT ACTGCTGGAA GTGGTTAAAC AATTCGACGC ACTCAATTTT
AGTCACCCCT ATGCCTTGAG TGCCCATGCA TATTTAGTCG AACTGTATGA GCGCCAAGGA
AAGCGTGACG CATCCACCGC TCACTGTATT GCTATCGGCA AAATGCGCCC TTGGGCCGAC
ACGCAGGAAC AACAACCTAT TTTCCGTACT CTACCAGACT ATCCAATGTC CTATGCGCAG
CGAGGTAAAA GTGGCTGGGT TCAGCTTAAA TTTACTATCG ATGAACATGG CTTCGTCAAA
AATCCTGAAA TTTTAGCTTC TAAGGGTGGG GCTTTATTTG AAAAAGAGAG TATTGAAACC
TTAGATAAAT GGCGTTACGT ACCCAAGTTT GAAAATGGCA AAGCCGTGGA AGCACAAACT
AGCGTGCAAC TGGATTACAC CATAAATCGA TAG
|
|---|
| Protein sequence | MSHGKTLPIA CLLALTLGTS LSVHASENSF TKAYSDYQAA VEKGDAAKIE ASAKTAYQLG
EAQYAKDSVD LANLALNWAS AIEKQVAPYP FTEKNLPKTA KANELYQLAL ANYKVHYGKK
ALELIDPLLG AAQTAVEAKD AKEDFLTAIA IAEKSDKKKL IADVKMAAFN RLSHTQLYTN
SVRRYAFDAY DIYKEILPEN AIDRVKATYV VGAVEFVEKH DGKAEPLLLE VVKQFDALNF
SHPYALSAHA YLVELYERQG KRDASTAHCI AIGKMRPWAD TQEQQPIFRT LPDYPMSYAQ
RGKSGWVQLK FTIDEHGFVK NPEILASKGG ALFEKESIET LDKWRYVPKF ENGKAVEAQT
SVQLDYTINR
|
|---|
| |