Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0530 |
Symbol | |
ID | 7089261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 607141 |
End bp | 608562 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643459457 |
Product | outer membrane efflux protein |
Protein accession | YP_002356487 |
Protein GI | 217971736 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.40399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAT CACGTGTGGC TTGGCTGTGT TTACTGCCCT TGCCTTGTTT ATTGCCTTTG GCTGGCCATG CCCAGCCCAC GAGCTTCACC GACGCTTGGC AACAAGTGCT GAAGGTGAGC GACAAGTTGC AAGCGCAATC CCAGGAAGTT AATCGCGCTA AAGGTGAAGA AGAGGCGGGC GAGAGCTTAA ATCTGCCCTC CTTGAGCCTT AATGGCAGTT ATACCCACCT CGAAAAACCG ATTGAACTGG ATCTTCGGGA TCTCAATCCC TTAGCCTCCC TTGATCCCGC GACGTTACCA CCCGCCCTTG GCGGTGCTCT GGCGAGTATT CCGGGGTCAA TGTTTGTTAC GCCTTTTACT GAGCAAGATA TCTTCCGCGC GAGCTTACAA GCCATGTGGC CGATTTATAC GGGCGGGCAG ATCACCGCTG CCCAAGGTAT ACACGCGGCT ATGGTGGCTG AGAAGCAACA AGAATTACAG CTTGCCACCC GTGATTTATT TACCCTGCTG GTGGACCGAT ATTACGCTGT CGATGTCACG CTGGCATTGG TGAACACCCA AACCGATCTC GTTGGATCTT TAACTAAGCA TGTTGATCAT GCGCTAGCGT TAGAGCGAGA AGGGCAAATC GCTAAGGTTG AGCGCCTCAA TGCGCAGGTC GCCTTAGACA ATGCTAAAGT CAATTTAGGC AGCGCTCGCC GTCAACACGA AATGGCAGTT ATTGCTCTGT CGCGCATGTT GCAGCAAAGC GATGTCGGTA CTGAGTCACC TCTATTTGTC TTGCCGCATG CGCCGTCTTT AGGCCAGCTC ACCCAAGTGA CGCTGAGCCA ACATCCAGCG CTTAAATTGC TCGAAGCGAA GGAAGCGCAG GCCAATGGCT TGGTTTCATT AGAACAGGGC AAGTATTACC CCACAGTATT CCTCTTTGGT AATTACACAC TTTACGAAGA CGACAGCCTG TTTTCTCAGG TAGAGCCTGA TTGGATGGTC GGTGTCGGCG TTAAAGTGCC CATTCTCAGC CGCGACGGTC GCAGTGGTAA GGTCGAGGCC GCCAAGAGTG CACTTTTGCA GGCCCGTTAT ACCAAGGCAC AAACGCGGCA AGATTTGAGT CTGTTACTGG ACCAAAGCTA TCGCCAATTA TTACAGGCCG AAGAAGAAGT GACGGCGCTC GATACCTCAC TCGAACTCGC CACCGAAAAC CTGCGCCTGC GGGAAATCGC CTTTAATCAA GGGCTTTCAA CTTCTATCGA CAGAGTCGAT GCCGAGCTGA AACTCAGCGC AGTCAAAACT CAACAACTGG CCGCCCGTTA TCGTTATGTG CAAGCCTATG CCAGATTAAT GGCCATCAGT GGTCAATTAG ATGAATTTAT CGGTCGTACC ATAGCCCTTA CCCAAGTGCA GGAGACAAAC AATGCGCGCT AA
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Protein sequence | MKLSRVAWLC LLPLPCLLPL AGHAQPTSFT DAWQQVLKVS DKLQAQSQEV NRAKGEEEAG ESLNLPSLSL NGSYTHLEKP IELDLRDLNP LASLDPATLP PALGGALASI PGSMFVTPFT EQDIFRASLQ AMWPIYTGGQ ITAAQGIHAA MVAEKQQELQ LATRDLFTLL VDRYYAVDVT LALVNTQTDL VGSLTKHVDH ALALEREGQI AKVERLNAQV ALDNAKVNLG SARRQHEMAV IALSRMLQQS DVGTESPLFV LPHAPSLGQL TQVTLSQHPA LKLLEAKEAQ ANGLVSLEQG KYYPTVFLFG NYTLYEDDSL FSQVEPDWMV GVGVKVPILS RDGRSGKVEA AKSALLQARY TKAQTRQDLS LLLDQSYRQL LQAEEEVTAL DTSLELATEN LRLREIAFNQ GLSTSIDRVD AELKLSAVKT QQLAARYRYV QAYARLMAIS GQLDEFIGRT IALTQVQETN NAR
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