Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0508 |
Symbol | |
ID | 7086984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 578538 |
End bp | 580217 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643459435 |
Product | pilus (MSHA type) biogenesis protein MshL |
Protein accession | YP_002356465 |
Protein GI | 217971714 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02519] pilus (MSHA type) biogenesis protein MshL |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGA TTAAATACTT TACACCTCTG CTCTCACTTT GCCTTGTGGC GTGTCAGACC ACAAATAGGC CACAGCCGGA GGCGAGTAAG GCGGAATTAG CGGCCTCAAT GGCGACAGCG ACGGCATCAA CGACGCCACC GCCTGCGACT ATGCCGGATG CGGTTCAGCG AGAATTGAAT TCGGGCGCTT TACTGTCAGG TTTAACCCCT GCGCTAGAAA CTGAGCGTCG TTTTGATGTC TCTGCCCATG ATGTGGATGC CAAAGTATTT TTTCCAAGCT TAGTCCAAGG TACGCCGCTG AGTGTTGCCG TGCATCCTGA TGTGCAAGGT ACGATTTCGC TATCCCTTAA AGGTGTAACC TTAAGCGAAG CGATTCAAGT GGTTGAAGAT ATCTACGGTT ACGAAGTGAG CCGTGAAGGG CGTATTCTAA GAGTGTTCCC CGCTGGAATG CGTACTGAGA CTTTCCCGCT GAATTATCTT TATATGGAGC GCGACGGCTT ATCAGTGACC TCTGTGAGTT CTGGACGGAT TTCTGATAGC AATAATTCCA ATAGTAATTC GAGCAATAAC AACTCAAATA ACAGTGGTTC GAGTAATAAT AATTCCAACA GCAGTAATGG TAGTAACTCC AGCAGCAATG GCAGCAGCGA TAGCAGTAAC GGTACCTTTA TCCGCTCGCG CACTAAGACT GATTTTTGGG GCGAGCTGAA AGAAACGTTG ACGGCGATTA TTGGTGACAC AGGAAATGGG CGGCAAGTGG TGGTCACGCC GCAGGCGGGT TTAGTGACCA TTCGTGCTTT CCCAAGTGAA TTACGCCAAG TTCGCACTTT CTTAAATTCT GCCGAGAGTC ATCTGCAGCG CCAAGTGATC TTAGAAGCTA AGATCATCGA AGTCACATTA TCCGATGGCT ATCAGCAGGG CATCCAATGG GACAATGTGC TTGGTCATGT TGGCAATACG AATGTGAATT TTGGGACTTC GAAAGGCCCA GGCTTAAGCG ATAAAATCAC CTCGGCGATT GGTGGCGTGA CCTCGCTGAG CATTAAAGGC TCCGACTTTA CGACCATGAT CAATCTGTTA GATACCCAAG GCGATGTGGA TGTATTGTCT AGCCCAAGGG TAACAGCATC GAATAACCAA AAAGCGGTGA TTAAAGTCGG TACCGATGAG TATTTTGTCA CTGACGTTTC ATCGACGACA GTTGGTGGCA CGCCGCCTGT GACCACTCCG CAAGTCGAGC TTACGCCGTT TTTCTCAGGC ATTGCCTTAG ATGTCACGCC GCAAATTGAT AGTGACGGCA ATGTGTTATT GCACGTGCAT CCATCCGTTA TCGATGTGAA AGAGCAGACT AAAGACATCA AAGTGAGTGA CGCTTCGTTG GAGCTACCTT TAGCACAGAG TGAAATTCGC GAGTCTGATA CCGTTATCCG CGCCGCTTCC GGTGACGTAG TCATCATCGG TGGTTTGATG AAGAGTGAAA GCATTGAAGT GGTATCGCAA GTGCCCTTGT TGGGTGATAT TCCCTACCTC GGTGAATTGT TTAAAAACCG TAGCAAGCAA AAGAAAAAAA CCGAGTTGAT TATTCTGTTA AAACCTACGG TAGTTGGCGT CGATACTTGG AAAACTGAGC TACAACGTTC TAAGACCTTA TTAGATCGTT GGTATCCGGA GACAAAGTAA
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Protein sequence | MKAIKYFTPL LSLCLVACQT TNRPQPEASK AELAASMATA TASTTPPPAT MPDAVQRELN SGALLSGLTP ALETERRFDV SAHDVDAKVF FPSLVQGTPL SVAVHPDVQG TISLSLKGVT LSEAIQVVED IYGYEVSREG RILRVFPAGM RTETFPLNYL YMERDGLSVT SVSSGRISDS NNSNSNSSNN NSNNSGSSNN NSNSSNGSNS SSNGSSDSSN GTFIRSRTKT DFWGELKETL TAIIGDTGNG RQVVVTPQAG LVTIRAFPSE LRQVRTFLNS AESHLQRQVI LEAKIIEVTL SDGYQQGIQW DNVLGHVGNT NVNFGTSKGP GLSDKITSAI GGVTSLSIKG SDFTTMINLL DTQGDVDVLS SPRVTASNNQ KAVIKVGTDE YFVTDVSSTT VGGTPPVTTP QVELTPFFSG IALDVTPQID SDGNVLLHVH PSVIDVKEQT KDIKVSDASL ELPLAQSEIR ESDTVIRAAS GDVVIIGGLM KSESIEVVSQ VPLLGDIPYL GELFKNRSKQ KKKTELIILL KPTVVGVDTW KTELQRSKTL LDRWYPETK
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