Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0222 |
Symbol | |
ID | 7085878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 251058 |
End bp | 251969 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643459142 |
Product | Bile acid:sodium symporter |
Protein accession | YP_002356182 |
Protein GI | 217971431 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0522725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGTAA ACGTAAACCG CTTCTTCCCG CTGTTAGCAC TTATAGGCGC TGTGACCGCT TATTTGATGC CGAGTTGGTT TACTGAGCTT AAATCCGCCA TAGTGCCGCT GTTAGTGATC ATCATGCTCT CTATGGGACT CACCTTAGAT CTGCAGGATT TTGCTAATGC ATTCAAACAA AAACGCGCCG TACTGACTGG GTTGATACTG CAATTTTCGG TCATGCCGCT CAGCGCATTA TTGATCAGCC AGTTATTAGG ATTAGATAGG GAACTCACCA TCGGCATGGT GTTGGTGGGC AGTGTTGCAG GTGGCACTGC CTCAAACGTG GTCTGTTATT TGGCAAAAGG CGATGTGGCT TTATCGATAA CCATGACGGC ACTGTCGACC TTAGCGGGCG TAATATTAAC GCCACTGATT ATTAAGTTGT TGATTGGCGA AATGATCGAT ATCCCCTTCG CCGATATGCT ACTGAGCTTA GTGAAAATCG TGCTGTTCCC TGTCAGCGCA GGCGTGATCA TCAATCATTT CTTTAAATCG CTGGTGGCCA AAGTCGCTCC CGCATTGCCG TTGATTTCAA TCTTGGCAAT CGTGATGGCG ATTACCATTA TCGTGGCATT AAATGCCAAT CAGTTTGATA AAGTTGGCCC CATTATTTTG CTGGCAGTGT TCTTACATAA TGGTTTCGGC CTCGCTTTAG GCTACTTTTG CTGCCGTTTA TTAGGCTTTA ACCATACCGT CTGCAAAACC ATTTCCATCG AAGTCGGCCT ACAAAACTCT GGCCTCGCTA CGGCTTTGTG CATCAAGTTT TTTAGCCCTA TTTCTGCCAT TCCCAGCGCG ATATTCTCGA TATGGCATAA CCTATCAGGC GCCATCTTGG CGGGATATTG GGCGAGGGAA GCGCAAGATT AA
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Protein sequence | MLVNVNRFFP LLALIGAVTA YLMPSWFTEL KSAIVPLLVI IMLSMGLTLD LQDFANAFKQ KRAVLTGLIL QFSVMPLSAL LISQLLGLDR ELTIGMVLVG SVAGGTASNV VCYLAKGDVA LSITMTALST LAGVILTPLI IKLLIGEMID IPFADMLLSL VKIVLFPVSA GVIINHFFKS LVAKVAPALP LISILAIVMA ITIIVALNAN QFDKVGPIIL LAVFLHNGFG LALGYFCCRL LGFNHTVCKT ISIEVGLQNS GLATALCIKF FSPISAIPSA IFSIWHNLSG AILAGYWARE AQD
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