| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0109 |
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| Symbol | |
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| ID | 7087374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 128564 |
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| End bp | 130609 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643459033 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_002356073 |
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| Protein GI | 217971322 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCATTG TAACTGCGGG TCATGTCGAT CATGGCAAGA GTACGCTTAT TCGCGCTTTG
ACTGGGATGA ATACCGATCG TCTGCCGGAG GAGAAACGCC GCGGTATGAC GATTGATCTC
GGCTATGCGT TTATGCCGCT TAGGGATGGT TCGCGGCTTG CTTTTATTGA TGTGCCTGGG
CATGAAAAAT TTATCAACAA CATGCTGGTG GGCGTGAGTC ATGCTCGGCA TGCCTTACTC
GTGCTGGCCT GTGATGATGG CGTTATGCCG CAAACCCGCG AACATCTGCA AATCCTGGCG
CTTTTACCTT TGCACAGTTT GACCTTAGTA CTGACTAAGC GGGATCTGGT TGATAGTGAT
ATGGCTGAGC AGCTTGTCGC CGATGGCTTA ACTTTGCTGG CCGAGTATGG CATTGAGGCC
AGTGGTATTT TTCAGGTGTC GGCAAGTGAA ACTGCCGACT TAGCATCCAA TGGTGTGGCC
GCGCTGAAGG CGCATATTCT TGATTTAGCT GAGCAGGAGT CTAAGCGGGC TGAGGATGCC
AGCAGTTTTA GGATGACGCT CGATCGCGCC TTTAGTGTGA AGGGCGCAGG TTGTGTGGTT
ACGGGCACAG TGATCAGCGG CAATGTGTGC GTGGGTGATA GTCTTTTTAG CTCAGGACAA
AAGGCCAAGT TGAGAGTACG AGGCATCCAT TGTCAGGGAC AAGAAGCCCA AAGTGCCGTC
ACGGGGACAC GTGTAGCACT CAATTTAACC GGAGTTGATA ACCATAGGTC GCCCGAGCGC
GGCGATTGGC TGAGCAGCTT GCCTCAAGCT GAGCTCTGTA GCCGCCCTGT GGTGCATATT
CGAGTCTTCG ATTTATTAGG TATTGAGCCC TTGGTGCATT GGCAAAATGT TCACTGTCAC
CATGGCGCTG ATCATACTTT AGGGCGAGTT TCGCTGTTAA ATGAAGCTGA TGCTGAAGGT
TTTTATCTGG CGGAGTTGGT ACTCGAAAAG CCGCTACTTT TATGTCAAGA CGACCGTATC
GTCCTGCGCC ACATTGGCGG TAAACAGACT TTAGGTGCTG GGCGAGTATT GGCACTTAAA
GTCCCCAATC GTAAGAAGCG AACACCTGAA CGAGTTGCGA GGTTACAGCA AGTAGCGCGC
TTGGATAATC CAGCCCATGT AGTGGCTTTA CTCGGTCAAA CTCAGGCACT AGAACTTGCT
GAAATTGCGT GGCGTTGGCA ATTAACCGAC GAAGGGCTCG CTATGCTCTT AGCCCAAGCG
GGTTTAGTCC GTCTTGGCGA GTTTGCCGTG GCCACACGTT TACTTGAGCA AGAAAAACAA
CAGTTTATTA CTTTACTGAG CGAGTTCCAT CAACAACATC CCGACCAACT TGGACTGGGA
CGTAATCGCC TGCAACGCAT GAGCCACAGC GCTTTGCCGC CCGAATTAGC CAATAAAGTG
CTCGATACGC TGTGCCAAGA GGGGCGCATG GTATTGCGTG GCGCCCTGTT GCAATTGGCC
GAGCACAGAA TAGTGCTCGA TGCTGAGGCG CAGCATTGTT GGCAGGCACT TGCGCCTTGG
CTTGCAGAGC AAACCGCCCC TGTGTGGGTC ACCGAAATGG GCGAATACCT TGAGCTGGAG
CCTGCCAAAT TAAGGCTGCT GTGTTTCCAG CTGGTGCAAC AGGGGTTTAT TACTGCAGTG
GTGAAAGACA GGTATTTACT CAGTGAACAA CTTTGCTATT ACGCCAGCTT AGTGCGTACT
CACGTCGCTG AACACGGCAA GCTCGAAACC GCTGAATTTA AAGACTTAAT AGGGCTTGGT
CGCAAGGTCA GCATTCAGCT GCTTGAGTTT TTTGACAGAA GTGGTTTTAC CCGTAGGAAA
TATCGCAGTA ATAGCCGGGA AATTCGGGAT GCGGAGCTTT TCTTCTCCCA TGAGAATTGG
CGGAAGAACA TAGGAGTCGA ACCTACCCAG GACTGCTGGC AGCCCTACCC GGATTTGAAA
TCCGGACGCC TCACCGGAGA CGACGTTCTT CCAATAGAAG ACCTAGGGAT AGTAGAAAAT
GCTTAA
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| Protein sequence | MIIVTAGHVD HGKSTLIRAL TGMNTDRLPE EKRRGMTIDL GYAFMPLRDG SRLAFIDVPG
HEKFINNMLV GVSHARHALL VLACDDGVMP QTREHLQILA LLPLHSLTLV LTKRDLVDSD
MAEQLVADGL TLLAEYGIEA SGIFQVSASE TADLASNGVA ALKAHILDLA EQESKRAEDA
SSFRMTLDRA FSVKGAGCVV TGTVISGNVC VGDSLFSSGQ KAKLRVRGIH CQGQEAQSAV
TGTRVALNLT GVDNHRSPER GDWLSSLPQA ELCSRPVVHI RVFDLLGIEP LVHWQNVHCH
HGADHTLGRV SLLNEADAEG FYLAELVLEK PLLLCQDDRI VLRHIGGKQT LGAGRVLALK
VPNRKKRTPE RVARLQQVAR LDNPAHVVAL LGQTQALELA EIAWRWQLTD EGLAMLLAQA
GLVRLGEFAV ATRLLEQEKQ QFITLLSEFH QQHPDQLGLG RNRLQRMSHS ALPPELANKV
LDTLCQEGRM VLRGALLQLA EHRIVLDAEA QHCWQALAPW LAEQTAPVWV TEMGEYLELE
PAKLRLLCFQ LVQQGFITAV VKDRYLLSEQ LCYYASLVRT HVAEHGKLET AEFKDLIGLG
RKVSIQLLEF FDRSGFTRRK YRSNSREIRD AELFFSHENW RKNIGVEPTQ DCWQPYPDLK
SGRLTGDDVL PIEDLGIVEN A
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