Gene Sbal223_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0088 
Symbol 
ID7087353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp100734 
End bp101414 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content45% 
IMG OID643459014 
Product2,3-diketo-5-methylthio-1-phosphopentane phosphatase 
Protein accessionYP_002356054 
Protein GI217971303 
COG category[C] Energy production and conversion 
COG ID[COG4229] Predicted enolase-phosphatase 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATCA GAGCCATAGT CGTAGACACA GCAGGCACCA CGACAGACCT AAACTTTATC 
CAAGATGTAC TATTCCCCTA TTCTGTCAAA GCCTTGCCAG ACTTTTTAGA ACAGAACCAA
CACAATGTAT TGGTTGAAAA CTGTATTTGT GACACTAAAG ATATCGCCCT AGAGCCTGAT
GCGGACTTAG CACGCGTGAC TGAAATTTTG CAGCAGTGGG TCAGCGAAGA TCGTAAAGCG
ACACCACTCA AAACTCTGCA AGGCTTGATC TGGAAGCAAG GCTACGCCCA TGGCGAATTT
AAGGGCCATA TCTTCCCTGA CTTTATTGAA GCGGTGAAAC GTTTTAGCGC GCAAAATCTT
CGTATTTACA GTTTTTCATC GGGCTCTGTT GATGCGCAAA AACTGCTATT CAGCCACAGT
GACGGCGGTG ATTTAACTGA GATGTTCAAC GGTCATTTTG ATACCCGTAC AGGCAACAAA
TTAGATAAAC AGGCTTACTG CAATATCCTC AACACTATCA GCTTAAGCCC TAAGCAAGTG
CTGTTTGTGT CTGATGTGAT TGAAGAATTA AAGGCTGCCG AAGCTGCAGG CATGATGACC
TGCCAAATGG TACGCGATAG CACACAGCGC ACTGGTGAGT TCCGTAAAAT CAGCAGCTTC
GATGAGTTGC TGATTGAATA A
 
Protein sequence
MGIRAIVVDT AGTTTDLNFI QDVLFPYSVK ALPDFLEQNQ HNVLVENCIC DTKDIALEPD 
ADLARVTEIL QQWVSEDRKA TPLKTLQGLI WKQGYAHGEF KGHIFPDFIE AVKRFSAQNL
RIYSFSSGSV DAQKLLFSHS DGGDLTEMFN GHFDTRTGNK LDKQAYCNIL NTISLSPKQV
LFVSDVIEEL KAAEAAGMMT CQMVRDSTQR TGEFRKISSF DELLIE