| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0029 |
|---|
| Symbol | |
|---|
| ID | 7089241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 33648 |
|---|
| End bp | 34934 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643458953 |
|---|
| Product | sun protein |
|---|
| Protein accession | YP_002355996 |
|---|
| Protein GI | 217971245 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000239617 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTGC GCGCGCTGGC TGCGAAAGCC ATCTTCGAAG TATTAGAAAA AGGCGTGTCA
CTTTCAGTGG CATTGCCCGA TCAACAAAAG CACCTTGCCA GCGGCAAAGA TAAAGCCCTA
CTTGCCGAGC TCTGCTACGG CGTGATGCGC ACTTTGCCGC AAATAGAGAA ACGCATCAGT
GAATGCCTAG CGAAACCACT CAAAGGTAAG CAAAGGATTA TCCACCAGCT GCTTATCATA
GGTTGCTATC AACTTTACTT CACTCGCATT CCAAGCCACG CCGCGATTTC AGAAACCGCC
GAAGCCTGTC GCCAGTTAAA ATTTGAAGGC ATGGTTAAGG TCGTTAATGG CGTACTGCGC
AACATTCAGC GCCAGCTTTC GCCGCTGAGT ACTGAGTCAG ATACCTTAAG CTACAACACG
CCCGCTTGGT TGATTAAGCG CTTGAAAGAA GCCTATCCCG AGCAGTGGCA AGATATCATT
CAACAAAGCC ATGAACGCCC ACCTATGTGG CTGCGTAATA ATCGCTTATC CCAGAGCCGT
ACCGAATACC TTGCTGCCTT AGCCGAACTC GAAATTGAAG CGAGCGAAGG CAGCAGTGCC
GATGCTATTC TTTTAGCGCA TCCAAAAGAC GTCGCCACAC TGCCACGCTT CCATGAAGGC
GCAGCCTCAG TGCAAGATGG CGCGGCGCAA TGGGCGGCGA CATTACTGGC GCCACAAGCG
AATGAGTTAA TCCTCGATGC CTGCGCGGCG CCCGGTGGCA AAAGCTGTCA TCTACTTGAA
CTTGAACCAA GCATTAAACT GGTTGCCGTC GACTTTGATG CCAAACGCCT CGAACGCGTG
CAACAGAACC TTGACCGCTT GTCATTAAAA GCGGAGCTTA TCCATGGCGA TGCGGCCAAT
ATTGACTCAT GGTGGCAAGG TGGACAATTT GATCGTATCT TACTGGACGC GCCATGCTCG
GCCACAGGAG TGATCCGCCG CCATCCCGAT ATTAAATGGT TACGTAAAAA CCATGACATC
GAAGAACTGG CTGAACTACA ACAGCAAATT CTCGATCATT GCTGGAAATG GCTCAAACCC
GGTGGCACGC TTCTTTATGC TACTTGCTCG ATTTTACCGC AGGAAAACCG CGACCAGATC
AGTGCGTTTT TAGAGAGAAC GGCAGATGCT AAGCTAGACA AACTCTCCCA GCAAAATTCG
CCACAGGATA TAGGTTGGCA AATCACGCCA GGACAAGACA ATATGGATGG GTTCTATTAC
GCCCGTTTAT TAAAAGCGAC CGATTAG
|
|---|
| Protein sequence | MNLRALAAKA IFEVLEKGVS LSVALPDQQK HLASGKDKAL LAELCYGVMR TLPQIEKRIS
ECLAKPLKGK QRIIHQLLII GCYQLYFTRI PSHAAISETA EACRQLKFEG MVKVVNGVLR
NIQRQLSPLS TESDTLSYNT PAWLIKRLKE AYPEQWQDII QQSHERPPMW LRNNRLSQSR
TEYLAALAEL EIEASEGSSA DAILLAHPKD VATLPRFHEG AASVQDGAAQ WAATLLAPQA
NELILDACAA PGGKSCHLLE LEPSIKLVAV DFDAKRLERV QQNLDRLSLK AELIHGDAAN
IDSWWQGGQF DRILLDAPCS ATGVIRRHPD IKWLRKNHDI EELAELQQQI LDHCWKWLKP
GGTLLYATCS ILPQENRDQI SAFLERTADA KLDKLSQQNS PQDIGWQITP GQDNMDGFYY
ARLLKATD
|
|---|
| |