| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4656 |
|---|
| Symbol | |
|---|
| ID | 5756490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009999 |
|---|
| Strand | + |
|---|
| Start bp | 63320 |
|---|
| End bp | 64192 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641291013 |
|---|
| Product | integrase catalytic region |
|---|
| Protein accession | YP_001557071 |
|---|
| Protein GI | 160873065 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 0.224377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGCCG CTACAATTAG CAGGGAGTTT TCCCGCAATA CGGGTAAACG TGGCTATCGC
TTTAAACAAG CTCAAACATC AACAATTAGA CGCCGATTAG CCGCTTGTAA AGCCATTAAA
ATGACAACAA CGACCGTTGA GTTAATTGAA TCAAAAATCA ACGCGAAATG GAGTCCAGAG
CAGGTGTCGG GGTGGCTTAG GGAAGACCAG TGCATTGATA TTAGTTATGA AACCATTTAT
AAGCACATTT GGTCAGACAA GCAAAATGGT GGCCATTTAT TCCAACAATT ACGCAGAAAA
GGTAAGGCTT ATCAATCACG TAGTAAGGAT AAGCAAGCCG GCAGAGGGTT TATTAAGAAC
CGTATAAGTA TTGATGAGCG CCCACATGTT GTTGATGATA AAAGTAGGGT GGGTGATTGG
GAAATTGACT TGGTTATAGG CAAAGGGCAC AGTGGCGCAC TGGTCACGAT TGTAGAGCGG
AAAACGAGCT TTACCGTTTC AACACGTGTA GATGACAAAT CAGCAAAAAC AGTAACAGCA
GCCACCATCG CTTTGTTAGC GCCGTTTAAA GGCGCGGTGC TCACTATAAC GGCGGATAAT
GGTAAAGAAT TTGCGTACCA TGAAAAGATG ACAGAAAGTT TGAAATGTGA TGTCTATTTT
GCCGATCCTT ATTGTTCATG GCAACGAGGA TTGAATGAAA ACACCAATGG CCTATTACGA
CAATATTGGC CGAAATCAAC AGACTTTAAA AAGGTATCGC AATCAGAGGT TCAGGATGTA
ATAGCCAATC TCAATGATAG GCCAAGAAAG AAACTAAATT ATAAAACACC AGCCAAATTA
ATGGCTGAAC ACATGGTGGC TATAGCCGCT TAG
|
|---|
| Protein sequence | MQAATISREF SRNTGKRGYR FKQAQTSTIR RRLAACKAIK MTTTTVELIE SKINAKWSPE
QVSGWLREDQ CIDISYETIY KHIWSDKQNG GHLFQQLRRK GKAYQSRSKD KQAGRGFIKN
RISIDERPHV VDDKSRVGDW EIDLVIGKGH SGALVTIVER KTSFTVSTRV DDKSAKTVTA
ATIALLAPFK GAVLTITADN GKEFAYHEKM TESLKCDVYF ADPYCSWQRG LNENTNGLLR
QYWPKSTDFK KVSQSEVQDV IANLNDRPRK KLNYKTPAKL MAEHMVAIAA
|
|---|
| |