| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4621 |
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| Symbol | |
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| ID | 5756456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009999 |
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| Strand | - |
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| Start bp | 33312 |
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| End bp | 34187 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641290979 |
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| Product | type-F conjugative transfer system pilin assembly protein TraF |
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| Protein accession | YP_001557037 |
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| Protein GI | 160873031 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02739] type-F conjugative transfer system pilin assembly protein TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACGT TGTTAAATAA CCGCTTACAA CATGCCGCCG CAGTGCCTTT TTTTCGGTGG
TCAAGCCGCG CGCCGTTGGC GTGGTTGTCC ACAAAAAAAG GGGATGCGGT GGTCAACAAG
CGCAGCGCGT TAGTGCTCCT TATGCTGACA ACGTTTTGCC TCGGCGCAAA CGCCACGGAT
GCACAAGGCT GGCGCTGGTA TAACGAACCG ACTGCCCCCA AGAAGCAAGC GCCTAAAAAG
GCCGAAACGC CAAGCGTCAC ACTCACGCGC ACCCAAACCC TGACGCCCAC CGAGCAGATG
GATTGGTTTC ACAGCTACTA CCAAGACACG CTCAATGACG CGGCGATAAA CAGCCAAGAC
AGCGAGAAAG TGGAAAGGGC CATGCTGCTT AATCAGTACG TCAGCAATAA ATCCTCAGAG
TTTGGCATGA CCTTCAAAAA GGTCCTGCTG GATAACCCTG AGCTGTCTTA CACCAAAGAC
AGACCGACGG AACAAGCGGC TAGAAGTACG TATTTATCAT TAGAGCGCAA CAAGAAGATG
CGCGCAGTAC GCACCCTTGC CGATGCGGGA TGGGGCCTGT TCTTTGTCTA CAAAGGCAGT
GAAGAAATTG ATATTGCGCT GGCGCCCAGC GTGCAGCAGT TCGCAACGCA ACATGGCATT
GAGCTACTGG GCGTCACGCT CGATGGTGTA GCACTGCCAG CCATCGTGCA GAACCGCCAA
AACGACCAGC ACATAAACGT CCCGTTTAGT CCCGCACTCG TGTTAGTTAA TCCTGGCACG
GGGGAAATGA AACCGCTCGC TTATGGCTTT ATCTCTCAAG ACGATTTACT TGGCCGCTTC
CTGAACGTGG CCACCGATTT CGCCCCTGAC TTTTAA
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| Protein sequence | MMTLLNNRLQ HAAAVPFFRW SSRAPLAWLS TKKGDAVVNK RSALVLLMLT TFCLGANATD
AQGWRWYNEP TAPKKQAPKK AETPSVTLTR TQTLTPTEQM DWFHSYYQDT LNDAAINSQD
SEKVERAMLL NQYVSNKSSE FGMTFKKVLL DNPELSYTKD RPTEQAARST YLSLERNKKM
RAVRTLADAG WGLFFVYKGS EEIDIALAPS VQQFATQHGI ELLGVTLDGV ALPAIVQNRQ
NDQHINVPFS PALVLVNPGT GEMKPLAYGF ISQDDLLGRF LNVATDFAPD F
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