Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4428 |
Symbol | |
ID | 5756259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 5233664 |
End bp | 5234713 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641290783 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001556845 |
Protein GI | 160877529 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGTATT TAATGATAGG TTTATACCTG CTGTGTTTTG CAGTCCACGC AAGCGCAGTA CCTGTAACAG TCGCCTTGCC CCAAACGGGC AGCACCAATG AACTGTTGAC ACTCAGTGGC TCCATTAAAT CCGCACGGGT GGCTCGCTTA TCGGCACGTA CCGATGGCCT AGTCGCCAAA GTGCTGGTCG ATGCGGGCTC CCAAGTCCGC GCAGGCCAGC CTTTACTCGC ACTCGACGAT ACCTTAGCCG TACATCAATT AGCACAGCGT CAAGCTGATG TGATGGCCGC TAAGACCATG CTGGCAGAAA AGCAGCGACT CCTCACCGAG GCGCAAACAC TCAGCGCTCA GCAGTTATTC CCCGAAACGG AGCGCGCGAT TCGCCAAGCG GCGTTAACCG AGGCCGAAGC CAATCTGCAG AGTTTAACGG CAGCACTCGC ACACCAAAAA GAGGTGGTCG CCCGCCACCA ACTGATGGCG CCGTTTGCGG GGGTGATTTC AAGCAAACAA ACTGAAACCG GTGAGTGGGT TAATGTCGGC ACTGAAATCT TCACCTTAGT GTCCCAAGAG CAGCTCTGGC TCGACATTCA AGTGCCACAG GAAATGTTCC AAAGCGTAGC CACTGCGACT CACGTGGACA TTGCCGCCGA CATGCTGCCT GAACAGCAGT TTATCGGCCA TGTGAATGCA CTCGTCCCCG TGAGCGACCA CAATGCTCGC AGCTTCTTGG TACGCTTGAC TATTCCCGAA GCGGATGGAC TTTTGATGCC CGGCACATCA GCCACTGCCA CCTTCCACTT ACAGCGGGCG CAACACAGTG TTGTCGTGCC GCAAGATGCG CTAGTCCGTC ACCCCGACGG CCAGTTCAGC GTCTTTACCG TGCAAAACAA CATAGCCCAA CGCCATACCG TTCAAGTGGG CCATACGAGC GCCATCGGGA TTGAAATCCT CAGTCCATTA CCCAAAGACG CGCCCGTGGT GATCCGCGGT AACGAGAGCC TACAAGACCA ACAGCCAGTC TCTGTACTCA ACTCTGCTGT AGGAGGTTAG
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Protein sequence | MRYLMIGLYL LCFAVHASAV PVTVALPQTG STNELLTLSG SIKSARVARL SARTDGLVAK VLVDAGSQVR AGQPLLALDD TLAVHQLAQR QADVMAAKTM LAEKQRLLTE AQTLSAQQLF PETERAIRQA ALTEAEANLQ SLTAALAHQK EVVARHQLMA PFAGVISSKQ TETGEWVNVG TEIFTLVSQE QLWLDIQVPQ EMFQSVATAT HVDIAADMLP EQQFIGHVNA LVPVSDHNAR SFLVRLTIPE ADGLLMPGTS ATATFHLQRA QHSVVVPQDA LVRHPDGQFS VFTVQNNIAQ RHTVQVGHTS AIGIEILSPL PKDAPVVIRG NESLQDQQPV SVLNSAVGG
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