Gene Sbal195_4367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4367 
Symbol 
ID5756198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp5161532 
End bp5162521 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content52% 
IMG OID641290723 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001556785 
Protein GI160877469 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCTA ATCAATCTGG GGCCGAGAAT ATCGGGCAGG AAACCGATAG TGATGCCATT 
GAAGCGGCGG CTGGCTGGAT GGCCCGTCTG TTGGCTGATG ACGCTACCGA GCAAGATAGT
ATTAACTGCC AACAATGGCG TGACCAAAGT TCACTTCACG AACAAGCATG GCAACGCATG
TGCCAGATCA CTGGCAAGTT CGCCTCCTTA CCTAAGGGTA CAGGCATCCA AGTGCTTGAA
AAAGTTAGTC AGTCCGTCGT ATCACGTCGC CGTTTCCTCA ATGTTTTAGC GCTGGCAGGG
ATTGGCGTCA CCGCGACTTG GCTTGGCGCG TCACAGACTC GACTTGGCCG GAGTCTGCAG
GCTCAATACC GCACCGGCCC AGACGAAACT CGCACCTTTA CTCTTGAAGA TGGCACCCGC
TTAACACTGA ACATAGATAC TGCGGTGGAT GTGGATTTCT CGGCAGAGAA GCGGCAAATA
CAACTCCATC AAGGAGAGAT CTTGATCAAA ACGGGTCATG AATCTCCACG TCGCCAATTC
TTAGTCACCA CCCACTTTGG CCAACTAATC GCGTTAGGTA CTGAGTTCTG CGTCCGCCAA
TACAAACACT ATGCCCGTGT AGCCGTAATC GACGGCGCAG TAGAAGCTTA TGCTGCCAGT
GGTGTTAAGC CACAACGAGT AGATGCAGGC CAACAAACTC GGTTTGATAA GACAATGATT
GCGCCTCCTG AACCGCTACA AAACGCAGCG ATAAGTTGGC GCCATGGCAA GCTAGTGGCA
GAAGGGATGC GGGTAGCAGA TTTTATCGAG GAGATCGGCC GCTATCGACC CGGCTTCACG
CTATACGATA GTGCCGTGGC CAATTTGACC ATCAGCGGGG TATTTTCTCT ACAAGATACC
GACCTTGCCC TACAAAGCCT TGCAAGCAGC CTGTCAGTAG AACTGCAATA TCGCACCACT
TACTGGGTCA AAGTGATCCC TGCCCGCTAA
 
Protein sequence
MPANQSGAEN IGQETDSDAI EAAAGWMARL LADDATEQDS INCQQWRDQS SLHEQAWQRM 
CQITGKFASL PKGTGIQVLE KVSQSVVSRR RFLNVLALAG IGVTATWLGA SQTRLGRSLQ
AQYRTGPDET RTFTLEDGTR LTLNIDTAVD VDFSAEKRQI QLHQGEILIK TGHESPRRQF
LVTTHFGQLI ALGTEFCVRQ YKHYARVAVI DGAVEAYAAS GVKPQRVDAG QQTRFDKTMI
APPEPLQNAA ISWRHGKLVA EGMRVADFIE EIGRYRPGFT LYDSAVANLT ISGVFSLQDT
DLALQSLASS LSVELQYRTT YWVKVIPAR